Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilN   Type   Machinery gene
Locus tag   I6I52_RS02405 Genome accession   NZ_CP068180
Coordinates   528964..529602 (+) Length   212 a.a.
NCBI ID   WP_004991757.1    Uniprot ID   A0A7T9UJB6
Organism   Acinetobacter ursingii strain FDAARGOS_1095     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 523964..534602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I52_RS02390 (I6I52_02390) - 524326..525129 (+) 804 WP_004991763.1 putative RNA methyltransferase -
  I6I52_RS02395 (I6I52_02395) ponA 525178..527742 (-) 2565 WP_004991760.1 penicillin-binding protein PBP1a -
  I6I52_RS02400 (I6I52_02400) pilM 527906..528964 (+) 1059 WP_004991759.1 pilus assembly protein PilM Machinery gene
  I6I52_RS02405 (I6I52_02405) pilN 528964..529602 (+) 639 WP_004991757.1 PilN domain-containing protein Machinery gene
  I6I52_RS02410 (I6I52_02410) pilO 529599..530312 (+) 714 WP_004991755.1 type 4a pilus biogenesis protein PilO Machinery gene
  I6I52_RS02415 (I6I52_02415) pilP 530312..530836 (+) 525 WP_004991753.1 pilus assembly protein PilP Machinery gene
  I6I52_RS02420 (I6I52_02420) pilQ 530899..533031 (+) 2133 WP_010588590.1 type IV pilus secretin PilQ family protein Machinery gene
  I6I52_RS02425 (I6I52_02425) aroK 533068..533610 (+) 543 WP_004991750.1 shikimate kinase AroK -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 23734.73 Da        Isoelectric Point: 4.9391

>NTDB_id=527842 I6I52_RS02405 WP_004991757.1 528964..529602(+) (pilN) [Acinetobacter ursingii strain FDAARGOS_1095]
MAKINLLPWRDELREQRKKQFIAFSAAVAVLGVVAVVLAWLFYDHKLNDQEQANQLVVSTNQNLDTQLKSLDGLQERRNA
IVERMKLIQGLEGQRPVTVRLIDELVRVTPSNMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
ADDKKDQNQSSVVPRVEESYGTFVVTTDLGEIGASVTEDNNDQSGSNTGAAQ

Nucleotide


Download         Length: 639 bp        

>NTDB_id=527842 I6I52_RS02405 WP_004991757.1 528964..529602(+) (pilN) [Acinetobacter ursingii strain FDAARGOS_1095]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAGCAGCGCAAGAAACAATTTATTGCATTTAGTGCTGC
CGTTGCAGTACTTGGGGTAGTTGCTGTGGTCTTAGCTTGGTTGTTTTATGATCATAAGCTTAATGATCAAGAACAAGCCA
ATCAATTGGTTGTCAGTACTAACCAGAATCTGGATACGCAGTTGAAATCACTGGATGGCTTACAAGAGCGCCGAAATGCG
ATTGTAGAGCGTATGAAGCTGATTCAAGGTTTGGAAGGTCAACGTCCAGTAACCGTTCGCTTGATTGATGAATTGGTGCG
GGTGACACCCAGTAATATGTATCTGACCAAATTCAGTCGTACAGGCGATAAATTTACCATTGAAGGCAAAGCGGAAAGTC
CAAATACTGTTGCAGAGTTATTGCGTAACTTAGAGGCTTCACCGTGGTATCGTAATGCCTTTATGAACTCCTTCTTGGCA
GCAGATGATAAAAAAGATCAGAATCAAAGCTCTGTGGTGCCGCGTGTCGAAGAAAGCTATGGCACTTTCGTTGTGACCAC
AGATTTGGGTGAAATTGGGGCATCAGTTACAGAAGATAATAACGATCAATCAGGTTCAAATACGGGGGCAGCACAATGA

Domains

Predicted by InterproScan.

Fimbrial assembly protein (PilN) (PilN)

(100-167)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T9UJB6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

73.239

100

0.736
  comN Acinetobacter baylyi ADP1

73.684

98.585

0.726