Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   I6I53_RS10745 Genome accession   NZ_CP068176
Coordinates   2169887..2170594 (-) Length   235 a.a.
NCBI ID   WP_004989690.1    Uniprot ID   A0A3F3L3W5
Organism   Acinetobacter ursingii strain FDAARGOS_1096     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2164887..2175594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I53_RS10725 (I6I53_10730) - 2166020..2167339 (+) 1320 WP_004989707.1 adenylosuccinate synthase -
  I6I53_RS10730 (I6I53_10735) - 2167433..2167744 (+) 312 WP_004998405.1 hypothetical protein -
  I6I53_RS10735 (I6I53_10740) - 2167852..2168634 (+) 783 WP_004998403.1 M48 family metallopeptidase -
  I6I53_RS10740 (I6I53_10745) - 2168692..2169738 (-) 1047 WP_004998401.1 NADP(H)-dependent aldo-keto reductase -
  I6I53_RS10745 (I6I53_10750) crp 2169887..2170594 (-) 708 WP_004989690.1 cAMP-activated global transcriptional regulator CRP Regulator
  I6I53_RS10750 (I6I53_10755) - 2170744..2171166 (+) 423 WP_004998400.1 OsmC family protein -
  I6I53_RS10755 (I6I53_10760) - 2171271..2171696 (+) 426 WP_227613732.1 GNAT family N-acetyltransferase -
  I6I53_RS10760 (I6I53_10765) - 2171698..2172501 (-) 804 WP_004998398.1 peptidoglycan DD-metalloendopeptidase family protein -
  I6I53_RS10765 (I6I53_10770) clpB 2172811..2175390 (+) 2580 WP_034698760.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26495.10 Da        Isoelectric Point: 4.6785

>NTDB_id=527834 I6I53_RS10745 WP_004989690.1 2169887..2170594(-) (crp) [Acinetobacter ursingii strain FDAARGOS_1096]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFESNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEKSLDDTDFDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=527834 I6I53_RS10745 WP_004989690.1 2169887..2170594(-) (crp) [Acinetobacter ursingii strain FDAARGOS_1096]
ATGACGTCAAACTTTTCACAACTCAGCACCGATGCTTTGTCTCCAGGTCAACTACCAGAGTCAGTCAAGGCGCTTTTAAA
ACGTGCTCATATTAATCGCTATCCAAAACGCACGACGATTGTTGACGCAGGTACCGAATCAAAATCGCTTTATTTGATTT
TGAAAGGCTCCGTTTCAATTATTTTACGTGAAGATGATGAACGTGAAATCGTAGTTGCTTATTTAAATCCTGGGGACTTT
TTTGGGGAAATGGGTCTCTTTGAATCAAATCCACAGCGTACAGCAGAAGTTCGTACACGTGATGTCTGTGAAATTGCCGA
AATTTCATATGACAATTTCCACGAACTTAGTAAGCAATATCCAGATTTAAGCTACGCGGTATTTGCCCAATTGGTACGTC
GTCTGAAAAATACGACCCGTAAAGTCACAGATTTAGCATTTATTGATGTTTCTGGTCGTATTGCACGCTGTTTGATTGAT
TTATCTGCTCAGCCAGAAGCCATGATTTTACCAAATGGTCGTCAAATCCGTATTACACGTCAGGAGATTGGCCGTATCGT
TGGTTGTTCCCGCGAAATGGTCGGTCGTGTTCTTAAAACGCTTGAAGAACAAGGCATGATTGAAACCGATGGTAAAGCGA
TTCTCATTTTTGATGCATCATTAGAAGAGAAGTCTCTGGATGATACTGATTTTGATGACGAAGAATAG

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3F3L3W5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

94.468

100

0.945
  crp Vibrio cholerae strain A1552

48.293

87.234

0.421
  crp Haemophilus influenzae Rd KW20

48.718

82.979

0.404