Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilN   Type   Machinery gene
Locus tag   I6I53_RS03695 Genome accession   NZ_CP068176
Coordinates   668700..669338 (-) Length   212 a.a.
NCBI ID   WP_004991757.1    Uniprot ID   A0A7T9UJB6
Organism   Acinetobacter ursingii strain FDAARGOS_1096     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 663700..674338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I53_RS03675 (I6I53_03680) aroK 664692..665234 (-) 543 WP_004994368.1 shikimate kinase AroK -
  I6I53_RS03680 (I6I53_03685) pilQ 665271..667403 (-) 2133 WP_125624944.1 type IV pilus secretin PilQ family protein Machinery gene
  I6I53_RS03685 (I6I53_03690) pilP 667466..667990 (-) 525 WP_004991753.1 pilus assembly protein PilP Machinery gene
  I6I53_RS03690 (I6I53_03695) pilO 667990..668703 (-) 714 WP_004994371.1 type 4a pilus biogenesis protein PilO Machinery gene
  I6I53_RS03695 (I6I53_03700) pilN 668700..669338 (-) 639 WP_004991757.1 PilN domain-containing protein Machinery gene
  I6I53_RS03700 (I6I53_03705) pilM 669338..670396 (-) 1059 WP_004991759.1 pilus assembly protein PilM Machinery gene
  I6I53_RS03705 (I6I53_03710) ponA 670560..673124 (+) 2565 WP_004991760.1 penicillin-binding protein PBP1a -
  I6I53_RS03710 (I6I53_03715) - 673173..673976 (-) 804 WP_201686681.1 putative RNA methyltransferase -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 23734.73 Da        Isoelectric Point: 4.9391

>NTDB_id=527813 I6I53_RS03695 WP_004991757.1 668700..669338(-) (pilN) [Acinetobacter ursingii strain FDAARGOS_1096]
MAKINLLPWRDELREQRKKQFIAFSAAVAVLGVVAVVLAWLFYDHKLNDQEQANQLVVSTNQNLDTQLKSLDGLQERRNA
IVERMKLIQGLEGQRPVTVRLIDELVRVTPSNMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
ADDKKDQNQSSVVPRVEESYGTFVVTTDLGEIGASVTEDNNDQSGSNTGAAQ

Nucleotide


Download         Length: 639 bp        

>NTDB_id=527813 I6I53_RS03695 WP_004991757.1 668700..669338(-) (pilN) [Acinetobacter ursingii strain FDAARGOS_1096]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAGCAGCGCAAGAAACAATTTATTGCATTTAGTGCTGC
CGTTGCAGTACTTGGGGTAGTGGCTGTGGTCTTAGCTTGGTTGTTTTATGATCATAAGCTTAATGATCAAGAACAAGCCA
ATCAATTGGTTGTCAGTACTAACCAGAATCTGGATACGCAGTTGAAATCACTGGATGGCTTACAAGAGCGCCGAAATGCG
ATTGTAGAGCGTATGAAGCTGATTCAAGGTTTGGAAGGTCAACGTCCAGTAACCGTTCGCTTGATTGATGAATTGGTGCG
GGTGACACCCAGTAATATGTATCTGACCAAATTCAGTCGTACAGGCGATAAATTTACCATTGAAGGCAAAGCGGAAAGTC
CAAATACTGTTGCAGAGTTGTTGCGTAACTTAGAGGCTTCGCCGTGGTATCGTAATGCCTTTATGAACTCCTTCTTGGCG
GCAGATGATAAAAAAGATCAGAATCAAAGCTCTGTGGTGCCGCGCGTCGAAGAAAGTTATGGCACTTTCGTTGTGACCAC
AGATTTGGGTGAAATTGGGGCATCAGTTACAGAAGATAATAACGATCAATCAGGTTCAAATACGGGGGCAGCACAATGA

Domains

Predicted by InterproScan.

Fimbrial assembly protein (PilN) (PilN)

(100-167)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T9UJB6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

73.239

100

0.736
  comN Acinetobacter baylyi ADP1

73.684

98.585

0.726