Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   K7B13_RS07620 Genome accession   NZ_CP082278
Coordinates   1507006..1508940 (+) Length   644 a.a.
NCBI ID   WP_212101326.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain 35M     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1502006..1513940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7B13_RS07595 (K7B13_07595) def 1502380..1502862 (+) 483 WP_212101320.1 peptide deformylase -
  K7B13_RS07600 (K7B13_07600) fmt 1502867..1503820 (+) 954 WP_013352216.1 methionyl-tRNA formyltransferase -
  K7B13_RS07605 (K7B13_07605) rsmB 1503807..1505150 (+) 1344 WP_115997225.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  K7B13_RS07610 (K7B13_07610) rlmN 1505154..1506245 (+) 1092 WP_014470411.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  K7B13_RS07615 (K7B13_07615) - 1506251..1507012 (+) 762 WP_212101323.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  K7B13_RS07620 (K7B13_07620) stkP 1507006..1508940 (+) 1935 WP_212101326.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  K7B13_RS07625 (K7B13_07625) rsgA 1508962..1509852 (+) 891 WP_115997228.1 ribosome small subunit-dependent GTPase A -
  K7B13_RS07630 (K7B13_07630) rpe 1509854..1510507 (+) 654 WP_014470407.1 ribulose-phosphate 3-epimerase -
  K7B13_RS07635 (K7B13_07635) - 1510575..1511219 (+) 645 WP_212101329.1 thiamine diphosphokinase -
  K7B13_RS07640 (K7B13_07640) spoVM 1511306..1511386 (+) 81 WP_003154329.1 stage V sporulation protein SpoVM -
  K7B13_RS07645 (K7B13_07645) rpmB 1511463..1511651 (-) 189 WP_003154328.1 50S ribosomal protein L28 -
  K7B13_RS07650 (K7B13_07650) - 1511911..1512273 (+) 363 WP_065521305.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 644 a.a.        Molecular weight: 71246.90 Da        Isoelectric Point: 4.9368

>NTDB_id=527720 K7B13_RS07620 WP_212101326.1 1507006..1508940(+) (stkP) [Bacillus amyloliquefaciens strain 35M]
MLTGKRISGRYHILRPIGGGGMANVFLAEDIILEREVAIKILRFDFVNDIDFIRRFRREAQSASSLDHPNIVSIYDIGEE
GDIYYIVMEYVEGMTLKEYITAQGPLHPKEALSVMEQIVSAIAHAHHNHIVHRDIKPHNILIDHLGHIKVTDFGIATALT
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGKMPFDGESAVSIALKHLQTETPSARKWNPSIPQS
VENIILKATAKDPFHRYESAEDMEADIRTAFDAGRLNEQKFSVQDDEEMTKAIPVITDDAIAAPQAETPAETDDKEQPAT
KKKKRKWPWVLLAVCFIFIMAAVLAVTVFPSLFMPKEVSVPDVRGMKYEKAEALLEKNGLQADPDMTDIEDEKIEEGLMV
KTDPKAGSAVKEGSSVKLYKSIGKPKTQLIDVKGRPIDDAKKTLKDKGFKHVNVKEENDDSAAGTVIDQNPSAGTDMVAS
DDEVSLTVSLGPADVTLRDLKTYSKEAASGYLEDNGLQLVEKEAHSDDVPEGQVMKQEPAAGTAVKPGSDVEVTFSLGPE
EKPAKTVKEKISIPYEPEHEGDELEVQIAIDDKDHSISDTYDSFKIKEPTEKTIELKIDQGQKGYYQVMVDHKVVSYKTI
EYPK

Nucleotide


Download         Length: 1935 bp        

>NTDB_id=527720 K7B13_RS07620 WP_212101326.1 1507006..1508940(+) (stkP) [Bacillus amyloliquefaciens strain 35M]
GTGCTAACCGGCAAGCGGATCAGCGGGCGTTATCATATCCTCCGGCCCATTGGCGGCGGCGGAATGGCAAACGTTTTTTT
AGCTGAGGACATCATTCTCGAACGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTTTGTGAATGACATTGATTTTATCA
GGCGTTTCAGAAGAGAAGCACAGTCGGCATCAAGCCTTGATCATCCGAATATCGTCAGTATTTACGATATCGGGGAGGAA
GGCGACATTTATTATATTGTCATGGAATATGTGGAAGGCATGACGTTAAAGGAATACATAACCGCACAGGGACCGCTTCA
TCCGAAAGAAGCGCTGTCTGTTATGGAGCAGATCGTCTCAGCCATCGCCCATGCCCATCATAACCATATCGTGCACCGGG
ATATCAAACCGCACAATATTTTGATAGATCATTTAGGACATATCAAGGTGACGGATTTCGGCATCGCCACAGCCCTCACT
TCGACGACAATCACCCATACGAATTCTGTGCTCGGCTCGGTTCATTATTTGTCTCCGGAGCAGGCGAGAGGCGGTCTGGC
AACGAAAAAATCGGATATTTACGCGCTGGGCATCGTGCTGTTTGAGCTTTTAACAGGCAAAATGCCTTTTGACGGAGAAT
CAGCCGTCAGCATTGCGTTAAAGCACCTGCAAACAGAAACGCCTTCCGCCAGAAAGTGGAACCCTTCCATTCCGCAGAGC
GTGGAAAACATTATTTTAAAGGCAACCGCCAAAGACCCGTTTCACCGCTATGAAAGCGCAGAGGACATGGAAGCGGACAT
CAGAACGGCTTTTGACGCCGGCAGGCTGAATGAACAAAAATTCTCCGTGCAGGATGATGAGGAAATGACGAAAGCGATTC
CCGTTATTACTGACGATGCGATAGCCGCGCCGCAGGCGGAAACGCCGGCAGAGACGGATGATAAAGAACAGCCGGCAACC
AAAAAGAAGAAACGGAAATGGCCGTGGGTTTTGCTGGCCGTCTGCTTTATTTTCATAATGGCGGCTGTTCTTGCAGTCAC
CGTGTTCCCGTCTTTATTTATGCCAAAAGAGGTAAGCGTCCCCGATGTACGGGGCATGAAGTACGAAAAAGCGGAAGCCC
TGCTTGAAAAGAACGGCCTCCAAGCGGATCCTGATATGACGGACATTGAAGATGAAAAAATCGAAGAAGGATTAATGGTC
AAAACTGATCCGAAAGCGGGTTCTGCCGTTAAAGAAGGCTCTTCTGTAAAACTGTACAAAAGCATCGGGAAACCGAAAAC
CCAGCTGATTGACGTGAAAGGCCGGCCGATCGACGATGCGAAAAAAACGCTTAAGGATAAAGGCTTCAAACATGTCAATG
TAAAAGAAGAGAACGATGACAGTGCGGCTGGCACCGTAATTGATCAGAACCCATCAGCCGGCACCGACATGGTCGCAAGC
GATGATGAAGTCAGCTTAACGGTCAGCCTCGGACCGGCGGACGTTACGCTGAGAGACTTAAAAACATACAGCAAAGAAGC
GGCTTCCGGGTATCTTGAAGATAACGGTCTGCAGCTTGTTGAAAAGGAAGCTCACTCAGATGACGTGCCTGAGGGACAGG
TCATGAAGCAAGAGCCGGCAGCCGGCACTGCAGTTAAGCCGGGAAGTGATGTTGAAGTGACGTTTTCGCTCGGGCCTGAA
GAAAAACCGGCGAAAACGGTAAAAGAAAAAATCAGCATCCCCTACGAACCCGAACATGAAGGGGACGAGCTTGAAGTGCA
AATCGCCATCGATGATAAAGACCACAGCATCTCTGATACGTATGACTCGTTTAAAATAAAAGAGCCGACTGAAAAAACAA
TTGAACTGAAGATTGATCAGGGACAGAAGGGGTATTATCAAGTGATGGTCGATCATAAAGTCGTCAGTTACAAAACAATT
GAATACCCGAAATAA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(11-260)

PASTA domain (PASTA)

(431-489)

PASTA domain (PASTA)

(495-556)

PASTA domain (PASTA)

(358-419)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

38.474

95.652

0.368
  stkP Streptococcus pneumoniae D39

38.312

95.652

0.366
  stkP Streptococcus pneumoniae R6

38.312

95.652

0.366
  stkP Streptococcus pneumoniae Rx1

37.987

95.652

0.363