Detailed information NTG0527465

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: K6973_RS06940
• Genome accession: NZ_CP082206
• Coordinates: 1361971..1363962 (-)
• Length: 663 a.a.
• NCBI ID: WP_218654627.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain DY107
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1356971..1368962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6973_RS06915 (K6973_06915)	dltD	1357266..1358522 (-)	1257	WP_218654624.1	D-alanyl-lipoteichoic acid biosynthesis protein DltD	-
K6973_RS06920 (K6973_06920)	dltC	1358515..1358754 (-)	240	WP_002984216.1	D-alanine--poly(phosphoribitol) ligase subunit DltC	-
K6973_RS06925 (K6973_06925)	dltB	1358772..1360028 (-)	1257	WP_218654625.1	D-alanyl-lipoteichoic acid biosynthesis protein DltB	-
K6973_RS06930 (K6973_06930)	dltA	1360025..1361563 (-)	1539	WP_222819177.1	D-alanine--poly(phosphoribitol) ligase subunit DltA	-
K6973_RS06935 (K6973_06935)	-	1361575..1361718 (-)	144	WP_012767158.1	teichoic acid D-Ala incorporation-associated protein DltX	-
K6973_RS06940 (K6973_06940)	uvrB	1361971..1363962 (-)	1992	WP_218654627.1	excinuclease ABC subunit UvrB	Machinery gene
K6973_RS06945 (K6973_06945)	-	1364149..1366326 (+)	2178	WP_218654628.1	ABC transporter substrate-binding protein/permease	-
K6973_RS06950 (K6973_06950)	-	1366326..1367066 (+)	741	WP_115246141.1	amino acid ABC transporter ATP-binding protein	-
K6973_RS06955 (K6973_06955)	tnpA	1367233..1367706 (-)	474	WP_070001343.1	IS200/IS605 family transposase	-
K6973_RS06960 (K6973_06960)	tnpA	1367981..1368454 (-)	474	WP_070001343.1	IS200/IS605 family transposase	-

Sequence

Protein

• Length: 663 a.a.
• Molecular weight: 75776.65 Da
• Isoelectric Point: 4.5211

>NTDB_id=527465 K6973_RS06940 WP_218654627.1 1361971..1363962(-) (uvrB) [Streptococcus dysgalactiae strain DY107]
MIDKRDDKPFHLVSKYEPSGDQPQAIETLVDNIEGGEKAQILLGATGTGKTYTMSQVINKVNKPTLVIAHNKTLAGQLYG
EFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYA
DSAVSLRPGQEISRDQLLNQLVDIQFERNDIDFQRGRFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGKTI
GEVDHLILFPATHFVTNDEHMEQSIAKIQAELEEQLKVFEAEGKLLEAQRLRQRTEYDIEMLREMGYTNGVENYSRHMDG
RAAGEPPYTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDQARKQMLVDYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGDYEMEQTDTIVEQIIRPTGLLDPEIDVRPSMGQMDDLLGEINQRVERGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNADGHVIMYADK
VTESMQRAIDETARRREIQIAYNEAHGIIPQTIKKDIRDLISISKAAESDVAETTVDYETMSRSERKEAIKTLQKQMQEA
AELLDFELAAQIRDMILELKLMD

Nucleotide

• Length: 1992 bp

>NTDB_id=527465 K6973_RS06940 WP_218654627.1 1361971..1363962(-) (uvrB) [Streptococcus dysgalactiae strain DY107]
ATGATTGATAAACGTGATGACAAACCTTTTCATTTGGTTTCAAAATATGAGCCATCTGGCGACCAACCCCAAGCTATTGA
GACCTTAGTAGACAATATTGAAGGTGGAGAAAAAGCTCAGATTCTTTTGGGAGCTACTGGGACGGGAAAGACCTATACCA
TGAGTCAGGTCATTAACAAAGTTAATAAACCGACCTTAGTGATTGCTCACAATAAAACCTTAGCGGGACAGCTTTATGGA
GAGTTCAAGGAATTTTTCCCTGATAATGCTGTGGAATATTTTGTTTCCTATTATGATTACTACCAACCTGAAGCCTATGT
GCCATCAAGCGACACCTATATCGAAAAAGACAGCTCTGTCAATGATGAGATTGATAAACTTCGTCATTCCGCAACCTCAG
CCTTATTGGAGCGTAATGATGTTATTGTAGTGGCTTCGGTCTCATGTATTTACGGACTGGGTTCTCCAAAAGAGTATGCT
GATTCAGCAGTGAGCCTCAGACCTGGACAAGAAATTTCTAGGGATCAACTGCTTAACCAGCTGGTGGATATTCAGTTTGA
GCGTAACGATATTGATTTTCAACGTGGCCGTTTTCGAGTTCGCGGGGATGTGGTTGAAGTTTTTCCCGCTTCAAGAGATG
AACATGCCTTTCGGATAGAATTTTTTGGAGATGAGATTGATCGTATTCGAGAGATCGAAAGTTTGACTGGTAAGACCATA
GGAGAAGTAGACCATTTGATTCTGTTTCCTGCTACTCACTTTGTTACCAATGATGAACACATGGAACAATCCATTGCTAA
GATTCAAGCTGAACTGGAAGAACAGTTGAAGGTTTTTGAAGCTGAAGGCAAATTATTGGAAGCGCAGCGATTACGCCAAA
GAACTGAGTATGACATTGAAATGTTAAGGGAGATGGGTTACACTAACGGGGTTGAAAACTATTCTCGCCATATGGATGGT
CGAGCAGCAGGAGAACCCCCCTATACGTTATTAGACTTCTTCCCAGAAGATTTTTTGATTATGATTGATGAAAGTCATAT
GACAATGGGGCAGATTAAAGGCATGTATAATGGTGACCAAGCTAGAAAGCAAATGCTAGTTGATTATGGGTTTAGGTTGC
CCTCTGCTTTGGATAATCGTCCTTTAAGACGGGAAGAGTTTGAAAGCCATGTACACCAAATCGTGTATGTTTCTGCTACT
CCAGGTGACTATGAAATGGAGCAGACAGATACAATTGTGGAACAAATCATTCGTCCAACGGGCTTGCTTGATCCTGAAAT
CGATGTGCGACCAAGTATGGGGCAAATGGATGACCTATTGGGAGAAATCAATCAGCGTGTTGAACGTGGTGAGCGGACCT
TTATCACAACACTGACGAAAAAAATGGCAGAAGACCTGACAGACTATCTAAAAGAAATGGGTGTCAAGGTCAAATATATG
CATAGCGACATAAAGACCTTAGAACGGACAGAAATTATCCGTGACTTGAGGTTAGGTGTCTTTGATGTACTTATTGGAAT
CAACTTACTGCGTGAGGGAATTGATGTGCCAGAAGTTAGTCTTGTCGCCATTTTGGATGCGGATAAGGAGGGCTTCCTCC
GTAATGAGCGTGGTTTGATTCAGACTATTGGACGAGCGGCCCGGAATGCAGATGGACATGTGATTATGTATGCTGATAAG
GTCACGGAATCGATGCAACGGGCTATCGATGAAACGGCTCGTCGTCGTGAGATTCAAATAGCTTATAATGAAGCACATGG
GATTATCCCGCAAACCATCAAAAAGGATATCAGAGATCTTATCAGTATCAGCAAAGCAGCGGAGTCCGATGTCGCAGAAA
CTACAGTGGACTATGAAACCATGTCTCGTTCTGAGCGAAAAGAAGCTATTAAAACCTTACAGAAGCAGATGCAAGAAGCA
GCTGAATTACTTGATTTTGAATTGGCTGCTCAAATTCGTGACATGATATTAGAGTTGAAACTAATGGATTAG

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (442-549)

• UvrB interaction domain (UvrB_inter) (164-254)

• Ultra-violet resistance protein B (UvrB) (556-598)

• UvrB/uvrC motif (UVR) (627-660)

• Type III restriction enzyme, res subunit (ResIII) (17-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	86.425	100	0.864
uvrB	Streptococcus pneumoniae D39	86.425	100	0.864
uvrB	Streptococcus pneumoniae TIGR4	86.275	100	0.863