Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   I6J05_RS05695 Genome accession   NZ_CP068073
Coordinates   1108826..1109455 (-) Length   209 a.a.
NCBI ID   WP_047132848.1    Uniprot ID   A0A143PE14
Organism   Staphylococcus condimenti strain FDAARGOS_1148     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1103826..1114455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J05_RS05665 (I6J05_05665) - 1104314..1105552 (-) 1239 WP_047132854.1 aminopeptidase -
  I6J05_RS05670 (I6J05_05670) - 1105591..1105797 (-) 207 WP_047132853.1 DUF1128 family protein -
  I6J05_RS05675 (I6J05_05675) - 1106033..1106497 (+) 465 WP_047132852.1 low molecular weight protein-tyrosine-phosphatase -
  I6J05_RS05680 (I6J05_05680) - 1106505..1106801 (+) 297 WP_047132851.1 hypothetical protein -
  I6J05_RS05685 (I6J05_05685) - 1106921..1107997 (+) 1077 WP_047132850.1 YihY/virulence factor BrkB family protein -
  I6J05_RS05690 (I6J05_05690) - 1108199..1108777 (+) 579 WP_047132849.1 beta-class carbonic anhydrase -
  I6J05_RS05695 (I6J05_05695) vraR 1108826..1109455 (-) 630 WP_047132848.1 response regulator transcription factor Regulator
  I6J05_RS05700 (I6J05_05700) vraS 1109445..1110488 (-) 1044 WP_047132847.1 sensor histidine kinase Regulator
  I6J05_RS05705 (I6J05_05705) liaF 1110485..1111186 (-) 702 WP_047132846.1 cell wall-active antibiotics response protein LiaF -
  I6J05_RS05710 (I6J05_05710) - 1111202..1111597 (-) 396 WP_047132845.1 hypothetical protein -
  I6J05_RS05715 (I6J05_05715) map 1111731..1112498 (-) 768 WP_047132844.1 type I methionyl aminopeptidase -
  I6J05_RS05720 (I6J05_05720) - 1112746..1113732 (+) 987 WP_047132843.1 FUSC family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23736.22 Da        Isoelectric Point: 4.6397

>NTDB_id=526943 I6J05_RS05695 WP_047132848.1 1108826..1109455(-) (vraR) [Staphylococcus condimenti strain FDAARGOS_1148]
MTIKVLFVDDHEMVRIGISSYLSTQPDIEVVGEGKSGKEAIEKAHELHPDLILMDLLMEDMDGVEATQQIKKDLPDIKVL
MLTSYIEDNEVYRALDAGVDSYILKTTSASDIAEAIRKTQHNESVFEAEVLVKMRNRMNQRAELYEMLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHDLIQ

Nucleotide


Download         Length: 630 bp        

>NTDB_id=526943 I6J05_RS05695 WP_047132848.1 1108826..1109455(-) (vraR) [Staphylococcus condimenti strain FDAARGOS_1148]
ATGACGATTAAAGTGCTATTTGTTGATGACCATGAAATGGTGCGTATCGGCATTTCAAGTTATTTATCGACACAACCAGA
TATTGAAGTGGTAGGGGAAGGAAAGTCTGGAAAAGAAGCTATTGAAAAAGCACATGAACTGCATCCTGATTTAATATTAA
TGGATTTATTGATGGAAGATATGGATGGTGTTGAAGCTACACAGCAAATCAAAAAAGATTTGCCAGATATTAAAGTGTTG
ATGTTAACAAGTTATATTGAAGATAATGAAGTTTATCGTGCACTAGATGCAGGGGTAGACAGTTATATCCTCAAAACAAC
AAGTGCAAGTGACATTGCAGAGGCAATTAGAAAAACACAACATAATGAATCTGTATTTGAAGCAGAAGTACTTGTTAAAA
TGCGTAATCGCATGAACCAACGTGCTGAATTATATGAAATGCTCACTGAAAGAGAGATGGAAATCCTGTTATTAATTGCA
AAAGGGTATTCCAATCAAGAAATTGCAAGTGCTTCTCATATTACAATTAAGACAGTAAAAACGCATGTTAGTAATATTTT
AAGTAAATTAGAAGTGCAAGATAGAACACAAGCAGTTATTTACGCTTTCCAACATGATTTAATCCAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-202)

Response regulator receiver domain (Response_reg)

(5-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A143PE14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

91.388

100

0.914
  degU Bacillus subtilis subsp. subtilis str. 168

35.268

100

0.378