Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   I6J05_RS05700 Genome accession   NZ_CP068073
Coordinates   1109445..1110488 (-) Length   347 a.a.
NCBI ID   WP_047132847.1    Uniprot ID   A0A143P7E7
Organism   Staphylococcus condimenti strain FDAARGOS_1148     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1104445..1115488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J05_RS05670 (I6J05_05670) - 1105591..1105797 (-) 207 WP_047132853.1 DUF1128 family protein -
  I6J05_RS05675 (I6J05_05675) - 1106033..1106497 (+) 465 WP_047132852.1 low molecular weight protein-tyrosine-phosphatase -
  I6J05_RS05680 (I6J05_05680) - 1106505..1106801 (+) 297 WP_047132851.1 hypothetical protein -
  I6J05_RS05685 (I6J05_05685) - 1106921..1107997 (+) 1077 WP_047132850.1 YihY/virulence factor BrkB family protein -
  I6J05_RS05690 (I6J05_05690) - 1108199..1108777 (+) 579 WP_047132849.1 beta-class carbonic anhydrase -
  I6J05_RS05695 (I6J05_05695) vraR 1108826..1109455 (-) 630 WP_047132848.1 response regulator transcription factor Regulator
  I6J05_RS05700 (I6J05_05700) vraS 1109445..1110488 (-) 1044 WP_047132847.1 sensor histidine kinase Regulator
  I6J05_RS05705 (I6J05_05705) liaF 1110485..1111186 (-) 702 WP_047132846.1 cell wall-active antibiotics response protein LiaF -
  I6J05_RS05710 (I6J05_05710) - 1111202..1111597 (-) 396 WP_047132845.1 hypothetical protein -
  I6J05_RS05715 (I6J05_05715) map 1111731..1112498 (-) 768 WP_047132844.1 type I methionyl aminopeptidase -
  I6J05_RS05720 (I6J05_05720) - 1112746..1113732 (+) 987 WP_047132843.1 FUSC family protein -
  I6J05_RS05725 (I6J05_05725) - 1113782..1114507 (-) 726 WP_047132842.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40101.54 Da        Isoelectric Point: 5.0629

>NTDB_id=526944 I6J05_RS05700 WP_047132847.1 1109445..1110488(-) (vraS) [Staphylococcus condimenti strain FDAARGOS_1148]
MNHYIRAIGSMLILIYSILAIFFFIDKVFVNIVFFQGMFYTQIFGIPVFLFLNIIVILMCIIVGSVLAYKVNQQNHWIKD
QIEHSIEGEVVGINDQNIELYQETLDIYHMLVPLNQELHRLRIKTQDLTNETYNLNDTKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPTLEKMVQDSQLEMRALLLHLRPLGLKDRSLGEGIKDLVVDLQKKVPMKVVYDI
EDFEVPKGIEDHLFRITQEGISNTLRHAEGTKLTIDLYNKDDYLLLRIQDDGKGFDVDEKMEKSYGLKNMRERALEIGAT
LHIVSLPGAGTRIEVKAPLNKEEFDDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=526944 I6J05_RS05700 WP_047132847.1 1109445..1110488(-) (vraS) [Staphylococcus condimenti strain FDAARGOS_1148]
ATGAACCATTATATAAGAGCGATAGGTTCAATGTTAATATTGATTTACAGCATTTTAGCTATTTTCTTTTTCATCGATAA
AGTCTTTGTAAATATTGTCTTTTTTCAAGGAATGTTCTATACACAAATTTTCGGAATTCCAGTTTTTTTGTTTTTAAATA
TCATTGTAATATTGATGTGTATTATCGTAGGTTCTGTATTAGCGTATAAAGTGAACCAGCAAAATCATTGGATTAAAGAC
CAAATTGAACATTCTATTGAAGGTGAAGTCGTAGGTATTAATGATCAAAATATCGAACTTTATCAAGAGACGTTAGATAT
CTATCATATGTTGGTACCTTTAAATCAAGAATTGCACCGCTTACGTATTAAAACACAAGATTTAACGAATGAAACTTATA
ATTTAAATGATACAAAAGTAAAAAAAATTATAGAAGATGAACGTCAACGTTTAGCAAGAGAACTGCATGACTCGGTGAGC
CAGCAATTATTTGCTGCAAGTATGATGTTGTCTGCTATAAAGGAAACTAAGTTAGAACCGCCTTTAGATCAACAAATTCC
AACACTTGAAAAGATGGTACAAGATTCACAACTTGAAATGCGTGCTTTATTGCTTCATTTACGTCCATTAGGCTTAAAGG
ACCGTTCATTAGGTGAAGGTATTAAAGACTTGGTTGTAGACTTGCAGAAAAAAGTTCCGATGAAGGTAGTTTATGATATC
GAAGATTTTGAAGTGCCAAAAGGGATAGAAGATCATTTATTCCGAATAACACAAGAAGGTATATCAAACACTTTGCGACA
TGCCGAAGGTACTAAATTGACGATAGATTTATATAATAAAGACGATTATTTACTATTACGTATTCAAGATGATGGTAAAG
GTTTTGATGTAGATGAAAAAATGGAAAAAAGTTATGGATTAAAAAATATGCGAGAACGCGCATTAGAAATCGGAGCAACA
CTGCATATTGTATCATTGCCTGGTGCAGGGACAAGAATTGAAGTGAAAGCGCCGTTGAACAAGGAGGAATTCGATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A143P7E7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

85.591

100

0.856