Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6J12_RS00650 Genome accession   NZ_CP068060
Coordinates   129604..131553 (+) Length   649 a.a.
NCBI ID   WP_003033805.1    Uniprot ID   I0SKK8
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 124604..136553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS00635 (I6J12_00635) ftsL 125514..125834 (+) 321 WP_003033780.1 cell division protein FtsL -
  I6J12_RS00640 (I6J12_00640) pbp2X 125838..128093 (+) 2256 WP_003033762.1 penicillin-binding protein PBP2X -
  I6J12_RS00645 (I6J12_00645) mraY 128095..129078 (+) 984 WP_003033744.1 phospho-N-acetylmuramoyl-pentapeptide- transferase -
  I6J12_RS00650 (I6J12_00650) amiA3 129604..131553 (+) 1950 WP_003033805.1 peptide ABC transporter substrate-binding protein Regulator
  I6J12_RS00660 (I6J12_00660) - 132024..132905 (+) 882 WP_003025917.1 class II fructose-bisphosphate aldolase -
  I6J12_RS00665 (I6J12_00665) - 133003..133464 (+) 462 WP_003033754.1 GNAT family N-acetyltransferase -
  I6J12_RS00675 (I6J12_00675) - 133803..134249 (+) 447 WP_003033720.1 LytTR family DNA-binding domain-containing protein -
  I6J12_RS00680 (I6J12_00680) - 134255..134917 (+) 663 WP_003033817.1 LiaF transmembrane domain-containing protein -
  I6J12_RS00685 (I6J12_00685) rpmB 135052..135240 (+) 189 WP_003025909.1 50S ribosomal protein L28 -
  I6J12_RS00690 (I6J12_00690) - 135416..135781 (+) 366 WP_003025907.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 649 a.a.        Molecular weight: 72168.33 Da        Isoelectric Point: 6.9845

>NTDB_id=526775 I6J12_RS00650 WP_003033805.1 129604..131553(+) (amiA3) [Streptococcus anginosus strain FDAARGOS_1155]
MKSSKWIIATGVVLSAGILLSGCGKSASSTSTYSYVYTQDPDTLNYLMANRATTSDVVTNLVDGLLENDQYGNLVPALAK
SWTVSKDGLTYTYKLRKDAKWYTSEGEEYASVKAQDFVTGLKYAADNKSEALYLVQDSVKGLDAYIKGETKDFSTVGVKA
LDDYTVQYTLSRAETYWNSKTTNNILFPVNADFLKSQGKNFGSVKPTSILYNGPYLLKSLTANSSMEFAKNPHYYDKKNV
HLDNIKLTYYDGSDQEALIRNFTDGAYSAARLYPNSSSFASVKKQYANNIIYSLQDATSYYYNFNLNRQSYNHTSKKTDA
QKAATQEAVLNKAFRQAINFAYNRTSYGAQSNGKEKVLRNTLVPPTFVSIGDKTFGDVVSSKLVNYGSEWSNMNLADAQD
AYYNPEKAKAKFAQAKAELQAKGVQFPIHLDVPADQTSKIGVQWESSMKQSVESVLGTENVIIDIQQMSSDELNNISYFA
NTAAQKDYDLYNGGWSGDYQDPSTYLDTLNIKNGGSLQNFGLEPGQENDKIKAVGLDTYTEMLAEANAETNEATRYEKYA
EAQAWLIDSGLTMPNLSLGGTPSVTKTVPFSRSYSLVGIKGASSSYFKYVKLQDKIVTTKEYESAKKKWLKEKETSNKKA
QDDYENHVK

Nucleotide


Download         Length: 1950 bp        

>NTDB_id=526775 I6J12_RS00650 WP_003033805.1 129604..131553(+) (amiA3) [Streptococcus anginosus strain FDAARGOS_1155]
ATGAAATCATCAAAATGGATTATTGCAACAGGAGTTGTGCTAAGCGCTGGAATCCTATTATCAGGTTGTGGCAAGTCAGC
TTCTAGCACATCAACTTATTCATACGTGTATACACAAGATCCAGACACGCTAAATTATCTGATGGCGAACCGTGCGACAA
CTTCAGATGTTGTGACTAACTTAGTTGATGGATTATTGGAAAATGACCAGTACGGAAATTTAGTTCCGGCGCTTGCTAAG
TCATGGACAGTCTCCAAAGATGGCTTGACATATACGTATAAATTACGTAAAGATGCTAAATGGTACACATCAGAAGGTGA
AGAGTACGCAAGTGTAAAAGCGCAAGACTTTGTAACTGGCTTGAAATACGCCGCAGATAATAAATCAGAAGCCCTTTACC
TCGTTCAAGATTCTGTCAAAGGTTTAGATGCTTACATCAAGGGTGAAACGAAAGATTTTTCAACGGTTGGAGTAAAAGCT
CTAGATGACTATACAGTACAGTATACACTCAGCCGTGCAGAGACTTATTGGAATTCAAAAACGACCAATAATATCCTCTT
CCCAGTTAATGCAGATTTCTTGAAATCACAAGGAAAAAATTTTGGTTCTGTAAAACCAACCAGCATTCTATACAATGGTC
CTTATCTATTGAAGTCTCTGACAGCCAATTCTTCTATGGAATTTGCTAAAAATCCTCATTACTATGATAAAAAGAATGTT
CATTTGGATAACATTAAATTGACATATTATGACGGCTCTGACCAAGAAGCCCTTATCCGTAACTTCACAGATGGTGCCTA
TAGTGCAGCTCGTCTTTATCCAAATAGCTCTAGTTTTGCTTCTGTTAAGAAACAATATGCTAACAATATCATCTATAGTT
TGCAAGATGCGACCAGCTACTATTATAACTTTAATTTAAATCGTCAGTCCTATAACCATACATCGAAGAAAACAGATGCT
CAAAAGGCTGCGACCCAAGAAGCGGTGCTAAATAAAGCTTTCCGTCAAGCTATCAACTTTGCCTATAATCGTACTTCTTA
TGGTGCACAAAGTAATGGGAAAGAAAAGGTATTGCGGAACACACTCGTGCCACCAACATTTGTTTCTATCGGTGATAAAA
CGTTTGGTGATGTTGTGTCTTCTAAGCTGGTAAACTATGGCTCAGAATGGTCAAACATGAATTTGGCCGATGCACAAGAT
GCTTATTACAATCCAGAAAAAGCTAAAGCAAAGTTTGCTCAAGCTAAAGCAGAACTGCAAGCAAAGGGTGTTCAGTTTCC
TATCCACTTAGATGTACCAGCTGATCAGACAAGTAAAATTGGTGTTCAATGGGAAAGTTCCATGAAACAATCTGTTGAGT
CTGTCTTAGGCACAGAAAATGTTATCATTGATATTCAACAAATGAGTTCAGATGAATTAAACAATATCAGTTATTTTGCT
AATACAGCTGCTCAAAAGGACTATGATTTGTATAATGGTGGTTGGTCTGGTGACTATCAAGACCCATCTACTTATCTAGA
TACTTTGAATATAAAAAATGGTGGTAGTTTGCAAAACTTTGGTCTGGAACCAGGTCAAGAAAATGATAAGATCAAGGCAG
TTGGACTGGACACATATACAGAGATGCTAGCAGAAGCAAATGCTGAAACCAACGAAGCTACACGCTATGAAAAATATGCC
GAGGCGCAAGCATGGTTAATTGATAGTGGCTTGACAATGCCAAACCTCTCTCTTGGAGGAACACCATCTGTGACGAAAAC
AGTTCCATTTAGCCGTTCTTATTCATTAGTTGGAATCAAAGGTGCTTCAAGCAGTTATTTCAAATATGTCAAACTGCAAG
ACAAAATTGTAACAACAAAAGAATATGAAAGTGCTAAAAAGAAATGGCTAAAAGAAAAAGAAACCTCTAATAAAAAAGCG
CAAGATGACTACGAAAATCATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SKK8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

56.469

100

0.572
  amiA Streptococcus salivarius strain HSISS4

56.469

100

0.572
  amiA3 Streptococcus thermophilus LMG 18311

56.317

100

0.57