Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   JJN14_RS08880 Genome accession   NZ_CP067992
Coordinates   1812751..1813383 (-) Length   210 a.a.
NCBI ID   WP_236253691.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V7-A3     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1807751..1818383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS08855 (JJN14_08855) recA 1808127..1809281 (-) 1155 WP_201058459.1 recombinase RecA Machinery gene
  JJN14_RS08860 (JJN14_08860) cinA 1809336..1810592 (-) 1257 WP_201058460.1 competence/damage-inducible protein A Machinery gene
  JJN14_RS08865 (JJN14_08865) brpA 1810660..1811697 (-) 1038 WP_049487428.1 biofilm formation/cell division transcriptional regulator BrpA -
  JJN14_RS08870 (JJN14_08870) - 1811705..1812223 (-) 519 WP_201058461.1 GNAT family N-acetyltransferase -
  JJN14_RS08875 (JJN14_08875) tsaE 1812213..1812656 (-) 444 WP_201058462.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  JJN14_RS08880 (JJN14_08880) comM 1812751..1813383 (-) 633 WP_236253691.1 competence protein Regulator
  JJN14_RS08885 (JJN14_08885) ndk 1813514..1813936 (-) 423 WP_049552313.1 nucleoside-diphosphate kinase -
  JJN14_RS08890 (JJN14_08890) rpoC 1814045..1817722 (-) 3678 WP_049487426.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 24073.26 Da        Isoelectric Point: 9.0497

>NTDB_id=526179 JJN14_RS08880 WP_236253691.1 1812751..1813383(-) (comM) [Streptococcus mitis strain S022-V7-A3]
MMERMKKQIRILLLLTVFGISSCSCLSLSTWALMLNQNCFYYLVGMLLLASIGAGINYYRGQGNQSYSVFKEDKQQFLYS
LLLLVNILGLALIVIEHILAGNTSVEGGVEAFLPSFFFLFGIDLLVFLPIQKYVNGLKKIFGKKEMCFISGLAILIFLRN
PWMLLSMIFYIALGMLFLELLVPKVIRWEVSFYSHLMRDILLVVFLLFLF

Nucleotide


Download         Length: 633 bp        

>NTDB_id=526179 JJN14_RS08880 WP_236253691.1 1812751..1813383(-) (comM) [Streptococcus mitis strain S022-V7-A3]
ATGATGGAAAGAATGAAAAAGCAAATTCGTATTTTGTTATTGCTGACAGTTTTTGGTATTAGTAGCTGTTCTTGTTTAAG
TTTATCGACTTGGGCCTTGATGTTAAATCAAAACTGCTTCTATTATTTAGTAGGTATGTTGCTCCTTGCCAGTATTGGGG
CAGGGATAAACTACTATAGAGGGCAGGGAAATCAATCTTATTCAGTTTTTAAGGAAGATAAGCAACAATTCTTGTATAGT
CTCTTGCTATTAGTAAATATTTTGGGTTTAGCTTTAATTGTCATAGAACATATCCTTGCAGGAAATACATCCGTAGAAGG
GGGTGTGGAAGCCTTTCTACCGAGTTTCTTTTTCTTATTTGGTATTGATTTGTTAGTTTTTCTGCCGATTCAGAAGTATG
TAAATGGATTGAAAAAGATTTTTGGAAAGAAGGAAATGTGTTTTATTAGTGGATTAGCTATTCTAATCTTTCTCAGAAAT
CCTTGGATGCTATTATCCATGATCTTTTATATTGCCTTGGGAATGCTATTTCTAGAACTGTTGGTGCCAAAAGTCATTCG
TTGGGAAGTTTCATTTTACAGTCATTTGATGAGAGATATCTTGTTAGTTGTCTTTTTACTGTTCCTATTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus mitis NCTC 12261

94

95.238

0.895
  comM Streptococcus mitis SK321

91.96

94.762

0.871
  comM Streptococcus pneumoniae D39

39.512

97.619

0.386
  comM Streptococcus pneumoniae R6

39.512

97.619

0.386
  comM Streptococcus pneumoniae TIGR4

39.512

97.619

0.386