Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   JJN14_RS06100 Genome accession   NZ_CP067992
Coordinates   1245123..1247090 (-) Length   655 a.a.
NCBI ID   WP_000837408.1    Uniprot ID   F9HCK4
Organism   Streptococcus mitis strain S022-V7-A3     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1240123..1252090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS06065 (JJN14_06065) - 1240760..1240954 (-) 195 WP_001081602.1 DUF3272 domain-containing protein -
  JJN14_RS06070 (JJN14_06070) dnaX 1240982..1242637 (-) 1656 WP_201058141.1 DNA polymerase III subunit gamma/tau -
  JJN14_RS06075 (JJN14_06075) - 1242637..1243134 (-) 498 WP_201058142.1 GAF domain-containing protein -
  JJN14_RS06080 (JJN14_06080) rpsA 1243220..1244422 (-) 1203 WP_001001630.1 30S ribosomal protein S1 -
  JJN14_RS06095 (JJN14_06095) - 1244795..1245025 (-) 231 WP_000037113.1 DUF2969 domain-containing protein -
  JJN14_RS06100 (JJN14_06100) amiA3 1245123..1247090 (-) 1968 WP_000837408.1 peptide ABC transporter substrate-binding protein Regulator
  JJN14_RS06105 (JJN14_06105) - 1247113..1248135 (-) 1023 WP_033676924.1 branched-chain amino acid aminotransferase -
  JJN14_RS06110 (JJN14_06110) parC 1248271..1250742 (-) 2472 WP_201058143.1 DNA topoisomerase IV subunit A -
  JJN14_RS06115 (JJN14_06115) - 1251007..1251507 (-) 501 WP_042751383.1 hypothetical protein -

Sequence

Protein


Download         Length: 655 a.a.        Molecular weight: 72716.34 Da        Isoelectric Point: 5.1322

>NTDB_id=526163 JJN14_RS06100 WP_000837408.1 1245123..1247090(-) (amiA3) [Streptococcus mitis strain S022-V7-A3]
MKSKKWLLTAGVVLSTTALLVACGKADKEADAPTTFSYVYAVDPASLDYSIATRTSTTDVIGNVVDGLMENDQYGNVIPS
LAEDWSVSKDGLTYTYKLRKGVKWYTSEGEEYAEVTAHDFVTGLKHVADGKSDGVSLIQNSIKGLDAYMTGETNDFSTVG
VKALDDYTVEYTLNKPESFWNSKVTTATMLPVNEEFLKASGKDYGAVTPAGILYNGPYILKTLTSKSLIEYEKNPNYWDK
EKVKIEKIKLTYYDGSDQESLIRSFSSGAYTTARLFPSSSNFASTLEQYGDKITYSPQDSSSYYFTFNVNRQSYNKTAKT
SEEQKTSTKEAMLNKDFRQAINFAFNRHSYAAQLNGEDGADKIIRNSLVPDNFVQAGGKNFGQIAQAELVNYGDQWKGVE
LVDGKDSIYNPDKAKAAFEKAKKDLESKGVTFPIHLDVPVEQTDTIAVQQSNSFKQSIESTLGAENVVIDVLQMTDNEKE
TITSQARVPSQKDYDLNSTGWAPSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKLGLDQYKKLLDDADSETTNLE
ERYEKYAKAQAWLTDSSLLMPTASSGGSPVVSNVVPFSKPYSQVGIKGDPYIFKGMKLQKDIVTTKEYEEALKKWQKEKL
ESNGKYQKELEKHIK

Nucleotide


Download         Length: 1968 bp        

>NTDB_id=526163 JJN14_RS06100 WP_000837408.1 1245123..1247090(-) (amiA3) [Streptococcus mitis strain S022-V7-A3]
ATGAAATCGAAAAAGTGGCTCTTAACAGCAGGAGTGGTCCTGAGCACAACAGCTCTTTTAGTGGCTTGTGGAAAAGCTGA
TAAAGAAGCAGATGCACCGACAACATTTTCATATGTCTATGCAGTAGATCCAGCATCTTTGGACTATAGTATAGCGACTC
GTACATCTACAACAGATGTCATCGGGAACGTGGTTGATGGCTTGATGGAAAACGACCAGTACGGAAATGTTATTCCTTCC
TTGGCTGAAGATTGGTCTGTCTCAAAAGATGGTTTGACTTATACCTATAAACTTCGTAAAGGAGTTAAATGGTATACATC
AGAAGGTGAAGAATACGCAGAAGTAACAGCCCATGACTTTGTGACAGGACTAAAACACGTAGCTGACGGCAAGTCAGACG
GTGTTTCTCTCATCCAAAATTCAATCAAGGGCTTGGATGCCTATATGACTGGTGAGACCAATGATTTCTCTACAGTTGGT
GTCAAGGCCTTGGACGATTACACAGTTGAATATACCCTAAACAAACCAGAAAGCTTCTGGAACTCTAAAGTCACAACAGC
GACGATGTTGCCTGTGAATGAAGAGTTTTTGAAGGCATCAGGTAAAGATTATGGAGCAGTTACTCCAGCAGGAATTCTCT
ACAATGGTCCTTATATCTTGAAGACCTTGACATCTAAATCGTTAATTGAATACGAGAAAAACCCAAATTACTGGGATAAA
GAAAAGGTAAAAATAGAGAAGATTAAATTGACCTACTACGATGGCTCTGATCAGGAATCGTTGATTCGTAGTTTCTCTTC
TGGTGCCTATACGACAGCCCGTCTCTTCCCAAGTAGCTCAAACTTTGCTTCTACTTTGGAACAATACGGAGATAAAATCA
CTTATAGCCCACAGGACTCAAGCAGCTATTACTTTACCTTTAACGTAAATCGTCAGTCATATAATAAAACTGCGAAAACA
AGTGAAGAACAAAAGACTTCTACTAAAGAAGCTATGCTTAATAAGGACTTCCGTCAGGCTATCAACTTTGCCTTCAACCG
CCATTCTTATGCTGCACAGCTAAATGGTGAAGACGGTGCGGACAAGATTATTCGTAACAGCCTCGTTCCTGACAACTTTG
TACAAGCAGGTGGTAAAAACTTTGGTCAAATCGCTCAAGCAGAGTTGGTGAACTATGGTGACCAATGGAAAGGTGTTGAG
CTAGTTGACGGTAAGGATTCTATCTACAATCCTGACAAGGCTAAAGCTGCTTTCGAAAAAGCTAAGAAAGACTTGGAATC
TAAAGGGGTAACATTCCCAATTCACTTGGATGTCCCAGTTGAACAAACAGATACCATCGCTGTTCAACAAAGCAACTCTT
TCAAACAGTCTATTGAATCAACTCTTGGTGCTGAAAATGTTGTTATCGACGTTCTTCAAATGACAGATAATGAAAAGGAA
ACAATCACTTCTCAAGCGCGTGTTCCTTCTCAAAAAGATTATGATTTGAACAGTACAGGATGGGCTCCAAGCTATCAAGA
CCCAGCATCTTACTTGAATATCATGGATCCTAAATCAGGTTCTGCTATGAAACACCTTGGTATTACTAAAGGGAAAGATA
AGGATGTTGTAGCTAAACTTGGTTTGGACCAATATAAGAAATTATTGGATGATGCAGATTCAGAAACTACAAATCTTGAA
GAACGCTATGAAAAATATGCCAAGGCTCAAGCTTGGTTGACAGATAGTTCATTATTGATGCCAACAGCCTCATCTGGTGG
TTCTCCAGTTGTAAGTAATGTCGTGCCATTCTCAAAACCATACTCACAAGTTGGTATTAAGGGTGACCCATATATCTTTA
AAGGAATGAAATTGCAAAAAGATATTGTTACAACAAAAGAATATGAAGAAGCACTGAAAAAATGGCAAAAAGAAAAATTG
GAATCAAATGGTAAGTACCAAAAAGAACTAGAAAAACACATTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9HCK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

52.879

100

0.533
  amiA Streptococcus salivarius strain HSISS4

52.432

100

0.527
  amiA3 Streptococcus thermophilus LMG 18311

52.273

100

0.527