Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JJN14_RS05120 Genome accession   NZ_CP067992
Coordinates   1051077..1051886 (-) Length   269 a.a.
NCBI ID   WP_201058013.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V7-A3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1046077..1056886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS05115 (JJN14_05115) - 1049084..1050970 (-) 1887 WP_201058012.1 Eco57I restriction-modification methylase domain-containing protein -
  JJN14_RS05120 (JJN14_05120) vicX 1051077..1051886 (-) 810 WP_201058013.1 MBL fold metallo-hydrolase Regulator
  JJN14_RS05125 (JJN14_05125) micB 1051888..1053237 (-) 1350 WP_084863416.1 cell wall metabolism sensor histidine kinase VicK Regulator
  JJN14_RS05130 (JJN14_05130) micA 1053230..1053937 (-) 708 WP_000722072.1 response regulator YycF Regulator
  JJN14_RS05135 (JJN14_05135) mutY 1053992..1055167 (-) 1176 WP_201058014.1 A/G-specific adenine glycosylase -
  JJN14_RS05140 (JJN14_05140) pta 1055250..1056224 (-) 975 WP_201058016.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29910.87 Da        Isoelectric Point: 6.1738

>NTDB_id=526153 JJN14_RS05120 WP_201058013.1 1051077..1051886(-) (vicX) [Streptococcus mitis strain S022-V7-A3]
MSEIGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAIENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=526153 JJN14_RS05120 WP_201058013.1 1051077..1051886(-) (vicX) [Streptococcus mitis strain S022-V7-A3]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCGTCGGGCTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAGCTTTTAGTGGATGCAGGCTTGTCTGGTAAGAAAATTACCAGCCTACTTTCTGAAATAAATCGCAAACCAGAAGACC
TTGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTGGGAGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAAACTTGGCAAGCTATAGAAAATAGCAAGTATCTTGGCAAGGTAGATTCTTCGCAAAAGCACAT
CTTTGAAATGGGCAAAACCAAGACATTTGGAGATATCGATATCGAGAGTTTTGGTGTAAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAGGATGACAAGAGTTTTGTCCTTTTGACAGATACAGGTTATGTTAGTGACCGTATGGCAGGA
ATTGTCGAGAATGCAGATGGCTATCTTATCGAGTCCAACCATGATGTAGAGATTTTGCGAGCAGGTTCCTATGCTTGGCG
CCTCAAACAACGAATCCTATCGGATCTTGGTCATCTTTCTAACGAGGACGGTGCTGAAGCCATGATTCGGACGCTAGGAA
ATCGCACTAAGAAAATCTATCTTGGTCACTTGTCTAAGGAAAACAATATCAAGGAGCTAGCTCACATGACCATGGTCAAT
CAGCTAGCCCAGGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCAACACCATTGAC
AGACATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77