Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   JJN14_RS01135 Genome accession   NZ_CP067992
Coordinates   240320..241330 (+) Length   336 a.a.
NCBI ID   WP_001090627.1    Uniprot ID   I0SX71
Organism   Streptococcus mitis strain S022-V7-A3     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 235320..246330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS01105 (JJN14_01105) folP 235783..236763 (+) 981 WP_201058687.1 dihydropteroate synthase -
  JJN14_RS01110 (JJN14_01110) - 236765..238087 (+) 1323 WP_201058688.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  JJN14_RS01115 (JJN14_01115) folE 238068..238622 (+) 555 WP_201058689.1 GTP cyclohydrolase I FolE -
  JJN14_RS01120 (JJN14_01120) folK 238664..239476 (+) 813 WP_201058690.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  JJN14_RS10015 - 239485..239757 (-) 273 WP_236253699.1 hypothetical protein -
  JJN14_RS01130 (JJN14_01130) - 239764..240081 (-) 318 WP_000886037.1 DUF960 domain-containing protein -
  JJN14_RS01135 (JJN14_01135) ccpA 240320..241330 (+) 1011 WP_001090627.1 catabolite control protein A Regulator
  JJN14_RS01140 (JJN14_01140) - 241381..242343 (-) 963 WP_201058691.1 asparaginase -
  JJN14_RS01145 (JJN14_01145) - 242409..243797 (+) 1389 WP_201058692.1 Cof-type HAD-IIB family hydrolase -
  JJN14_RS01150 (JJN14_01150) - 243854..244306 (-) 453 WP_004260486.1 universal stress protein -
  JJN14_RS01155 (JJN14_01155) - 244470..244769 (+) 300 WP_120770873.1 hypothetical protein -
  JJN14_RS01160 (JJN14_01160) - 245032..246246 (+) 1215 WP_000666455.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37169.19 Da        Isoelectric Point: 5.3350

>NTDB_id=526133 JJN14_RS01135 WP_001090627.1 240320..241330(+) (ccpA) [Streptococcus mitis strain S022-V7-A3]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVTYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGISYSEGLVFESKYTYEDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEEFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=526133 JJN14_RS01135 WP_001090627.1 240320..241330(+) (ccpA) [Streptococcus mitis strain S022-V7-A3]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGAGTTTCAATGGCGACGGTTAGCCGTGTAGT
CAATGGCAATAAGAATGTAAAAGAGAACACCCGTAAAAAAGTGCTTGAGGTGATTGATCGTTTGGATTACCGTCCAAATG
CCGTGGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTTGTGATTCCCAATATTACCAATGGCTATTTCTCA
ACGCTTGCTAAAGGGATTGATGATATCGCTGAAATGTACAAGTACAATATTGTCCTTGCTAATAGTGATGAGGACGATGA
CAAGGAAGTTTCAGTTGTCAATACACTATTTTCTAAGCAAGTGGATGGTATCATCTTTATGGGCTACCACTTGACTGAAA
AAATTCGTTCAGAGTTTTCTCGTTCTCGAACACCGGTTGTTCTTGCAGGAACTGTGGATGTAGAACATCAGCTTCCAAGT
GTCAATATTGACTACAAACAAGCAACGATTGATGCAGTGACCTACCTTGCTAAAGAAAATGAGCGCATTGCTTTTGTTAG
CGGTCCACTAGTGGATGATATCAATGGTAAGGTTCGTTTGGTTGGCTACAAGGAAGCCTTGAAAAAAGCAGGGATTTCTT
ATAGCGAAGGATTGGTATTTGAGTCTAAATACACTTATGAAGATGGCTATGCCTTGGCAGAACGCTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTAACAGGTGATGAATTGGCAGCAGGTGTCTTGAACGGTCTTGCTGATAAGGGTGTGTCAGTACC
AGAAGAGTTTGAAATCATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACTATTGCCCAAC
CTCTTTATGACCTTGGTGCTATTAGTATGCGTATGTTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTCGCTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0SX71

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

95.536

100

0.955

  ccpA Streptococcus gordonii str. Challis substr. CH1

89.521

99.405

0.89

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

98.512

0.571