Detailed information NTG0525934

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: JJN09_RS16480
• Genome accession: NZ_CP067412
• Coordinates: 3659251..3660315 (-)
• Length: 354 a.a.
• NCBI ID: WP_249482670.1
• Uniprot ID: -
• Organism: Pseudomonas sp. HS6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3654251..3665315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JJN09_RS16455 (JJN09_16430)	aroK	3654929..3655447 (-)	519	WP_025110261.1	shikimate kinase AroK	-
JJN09_RS16460 (JJN09_16435)	pilQ	3655452..3657530 (-)	2079	WP_249482666.1	type IV pilus secretin PilQ	Machinery gene
JJN09_RS16465 (JJN09_16440)	-	3657544..3658068 (-)	525	WP_249482667.1	pilus assembly protein PilP	-
JJN09_RS16470 (JJN09_16445)	pilO	3658065..3658688 (-)	624	WP_249482668.1	type 4a pilus biogenesis protein PilO	-
JJN09_RS16475 (JJN09_16450)	-	3658685..3659251 (-)	567	WP_249482669.1	PilN domain-containing protein	-
JJN09_RS16480 (JJN09_16455)	pilM	3659251..3660315 (-)	1065	WP_249482670.1	pilus assembly protein PilM	Machinery gene
JJN09_RS16485 (JJN09_16460)	-	3660532..3662979 (+)	2448	WP_249482671.1	penicillin-binding protein 1A	-
JJN09_RS16490 (JJN09_16465)	-	3663331..3664599 (-)	1269	WP_096819922.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38136.64 Da
• Isoelectric Point: 4.7582

>NTDB_id=525934 JJN09_RS16480 WP_249482670.1 3659251..3660315(-) (pilM) [Pseudomonas sp. HS6]
MLGLFNKKTNTLLGIDISSTSVKLLELSRQGERYRVEAYAVEPLPANAVVEKNIAELEGVGHALSRVLVKARTGLKSVAV
AVAGSAVITKVIEMDAGLSDDELENQLKIEADQYIPYPLDEVAIDFEVQGVSPRNPERVNVLLAACRKENVEVREAALAL
AGLTARVVDVEAYALERSFGLLATQLAASQERLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTI
EQAGLAKKQGGLPDDYVSEVLQPFREALVQQVSRSLQFFFASGQYNAVDHILLAGGTASVPGLDRLIEERLSTPTQVANP
FSDMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=525934 JJN09_RS16480 WP_249482670.1 3659251..3660315(-) (pilM) [Pseudomonas sp. HS6]
GTGCTAGGACTCTTCAACAAAAAGACCAATACGTTACTGGGGATCGACATCAGCTCCACGTCGGTGAAGCTGCTGGAGCT
GAGCCGTCAGGGGGAGCGCTACCGGGTCGAGGCGTACGCGGTGGAGCCGTTGCCGGCCAACGCCGTGGTCGAGAAGAACA
TCGCCGAACTCGAAGGCGTCGGTCATGCCCTGTCCCGCGTGTTGGTCAAGGCGCGCACCGGGCTCAAGAGCGTGGCGGTG
GCGGTGGCCGGTTCGGCAGTGATCACCAAGGTCATCGAAATGGACGCCGGGCTGTCCGACGACGAACTGGAAAACCAGCT
CAAGATCGAGGCCGACCAATACATCCCCTATCCCTTGGACGAAGTCGCCATCGACTTCGAGGTCCAGGGCGTTTCACCGC
GTAACCCCGAGCGGGTCAACGTGCTGCTTGCTGCCTGTCGCAAGGAAAACGTCGAAGTCCGTGAGGCGGCGCTGGCCCTC
GCCGGCCTGACCGCGCGGGTAGTGGATGTCGAGGCTTATGCGCTGGAGCGCTCGTTCGGACTGCTGGCCACGCAACTGGC
GGCGTCTCAGGAGCGCCTGACCGTCGCGGTGGTCGATATCGGTGCCACCATGACCACTCTCAGCGTCCTGCACAACGGTC
GGATCATCTACACCCGCGAGCAACTCTTTGGCGGGCGTCAGTTGACCGAGGAAATCCAGCGTCGCTATGGCCTGACCATT
GAGCAGGCCGGGCTGGCCAAGAAGCAGGGCGGTTTGCCGGACGATTATGTCAGCGAAGTCCTGCAGCCCTTTCGCGAGGC
GCTGGTGCAGCAGGTCTCGCGTTCCCTGCAATTCTTCTTCGCTTCCGGCCAGTACAACGCGGTCGACCACATTCTGCTGG
CCGGCGGCACGGCGTCGGTGCCCGGGCTCGATCGGCTGATCGAAGAACGCCTGAGTACCCCGACCCAGGTCGCCAATCCA
TTTTCCGACATGGCCTTGAGCAGCAAGGTCAACGCCGGGGCTTTGGCGAGCGATGCGCCAGCACTGATGATTGCCTGCGG
GCTCGCGCTCAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	54.237	100	0.542
pilM	Legionella pneumophila strain ERS1305867	48.588	100	0.486