Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JHT90_RS00515 Genome accession   NZ_CP067393
Coordinates   106590..106997 (+) Length   135 a.a.
NCBI ID   WP_201092796.1    Uniprot ID   A0A974NFS8
Organism   Entomomonas asaccharolytica strain F2A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 101590..111997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHT90_RS00495 (JHT90_00495) - 102403..102984 (+) 582 WP_201092774.1 CGNR zinc finger domain-containing protein -
  JHT90_RS00500 (JHT90_00500) tilS 103075..104373 (-) 1299 WP_201092782.1 tRNA lysidine(34) synthetase TilS -
  JHT90_RS00505 (JHT90_00505) - 104436..105326 (-) 891 WP_201092784.1 energy transducer TonB -
  JHT90_RS00510 (JHT90_00510) gshB 105415..106365 (-) 951 WP_201092786.1 glutathione synthase -
  JHT90_RS00515 (JHT90_00515) pilG 106590..106997 (+) 408 WP_201092796.1 twitching motility response regulator PilG Regulator
  JHT90_RS00520 (JHT90_00520) pilH 107044..107409 (+) 366 WP_201092806.1 twitching motility response regulator PilH -
  JHT90_RS00525 (JHT90_00525) - 107445..107996 (+) 552 WP_201092808.1 chemotaxis protein CheW -
  JHT90_RS15385 - 109033..110067 (+) 1035 Protein_104 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14945.30 Da        Isoelectric Point: 7.8534

>NTDB_id=525811 JHT90_RS00515 WP_201092796.1 106590..106997(+) (pilG) [Entomomonas asaccharolytica strain F2A]
MEQGEKLKVMVIDDSKTIRRTAETLLKKAGCDVFTAVDGFDALAKIADNHPNIIFVDIMMPRLDGYQTCALIKNNSRFKT
TPVIMLSSKDGLFDRAKGRIVGSDQYLTKPFSKDELLGAIKAHVPNFVPQDNAAE

Nucleotide


Download         Length: 408 bp        

>NTDB_id=525811 JHT90_RS00515 WP_201092796.1 106590..106997(+) (pilG) [Entomomonas asaccharolytica strain F2A]
ATGGAACAAGGTGAAAAACTTAAAGTCATGGTGATAGACGATTCTAAAACTATTCGTCGAACCGCCGAGACCCTGCTTAA
AAAAGCAGGATGCGATGTGTTTACTGCAGTAGACGGTTTTGATGCGTTGGCTAAAATAGCTGATAATCATCCAAATATTA
TTTTTGTAGATATTATGATGCCACGCCTTGATGGTTATCAAACTTGTGCACTTATAAAAAATAACAGCCGTTTTAAAACT
ACGCCTGTTATCATGTTATCATCTAAAGATGGTTTGTTTGATAGGGCAAAGGGAAGAATAGTAGGTTCAGATCAGTATTT
GACTAAACCGTTTAGTAAAGATGAGTTATTAGGTGCAATAAAAGCGCATGTTCCAAACTTTGTACCTCAAGATAATGCAG
CTGAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.23

90.37

0.689
  vicR Streptococcus mutans UA159

39.85

98.519

0.393
  pilH Synechocystis sp. PCC 6803

41.525

87.407

0.363