Detailed information NTG0052547

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BN118_RS04465
• Genome accession: NC_018518
• Coordinates: 940664..941803 (+)
• Length: 379 a.a.
• NCBI ID: WP_041166137.1
• Uniprot ID: -
• Organism: Bordetella pertussis 18323
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 935664..946803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BN118_RS04440 (BN118_0863)	-	937541..937927 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
BN118_RS04445 (BN118_0864)	-	937935..939068 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
BN118_RS04450 (BN118_0865)	-	939132..939383 (-)	252	WP_014905560.1	YfhL family 4Fe-4S dicluster ferredoxin	-
BN118_RS04455 (BN118_0866)	coaD	939438..939947 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
BN118_RS04460 (BN118_0867)	rsmD	939968..940588 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BN118_RS04465 (BN118_0868)	pilA	940664..941803 (+)	1140	WP_041166137.1	signal recognition particle-docking protein FtsY	Machinery gene
BN118_RS04470 (BN118_0869)	-	941850..943448 (-)	1599	Protein_887	CYTH and CHAD domain-containing protein	-
BN118_RS04480 (BN118_0870)	phnE	943630..944451 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
BN118_RS04485 (BN118_0871)	phnE	944448..945317 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
BN118_RS04490 (BN118_0872)	phnC	945335..946105 (-)	771	WP_014905562.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 39740.45 Da
• Isoelectric Point: 6.1602

>NTDB_id=52547 BN118_RS04465 WP_041166137.1 940664..941803(+) (pilA) [Bordetella pertussis 18323]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPAPMPAPQPEPQPEPQPQQPPEPQPPVAAAPEAPRKASW
LSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHL
RPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDP
AAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITL
TGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1140 bp

>NTDB_id=52547 BN118_RS04465 WP_041166137.1 940664..941803(+) (pilA) [Bordetella pertussis 18323]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGATGCCGGCCCCCCAGCCCGAGCCGCAGC
CCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGG
CTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAA
CCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGC
GCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTG
CGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAA
GACGACCTCGATCGGCAAGCTGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCC
GCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCG
GCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCT
GCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATG
AAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTC
ACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGT
GCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCG
CCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (95-154)

• SRP54-type protein, GTPase domain (SRP54) (175-377)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.623	91.029	0.488