Detailed information NTG0052465

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: N149_RS05415
• Genome accession: NC_022660
• Coordinates: 1089105..1091078 (+)
• Length: 657 a.a.
• NCBI ID: WP_002784244.1
• Uniprot ID: -
• Organism: Campylobacter coli 15-537360
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1084105..1096078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N149_RS05385 (N149_0642)	flgH	1084311..1085009 (+)	699	WP_002842806.1	flagellar basal body L-ring protein FlgH	-
N149_RS05390 (N149_0641)	ispG	1085075..1086148 (-)	1074	WP_023361846.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
N149_RS05395 (N149_0640)	-	1086208..1088046 (-)	1839	WP_002787399.1	primosomal protein N'	-
N149_RS05400 (N149_0639)	Cj0683	1088043..1088489 (-)	447	WP_002776437.1	type II secretion system protein	Machinery gene
N149_RS05405 (N149_0638)	-	1088486..1088731 (-)	246	WP_002776428.1	hypothetical protein	-
N149_RS05410 (N149_0637)	-	1088721..1088951 (-)	231	WP_002776426.1	hypothetical protein	-
N149_RS05415 (N149_0636)	uvrB	1089105..1091078 (+)	1974	WP_002784244.1	excinuclease ABC subunit UvrB	Machinery gene
N149_RS05420 (N149_0635)	-	1091113..1092537 (-)	1425	WP_002776421.1	anaerobic C4-dicarboxylate transporter	-
N149_RS05425 (N149_0634)	-	1092724..1093974 (-)	1251	WP_002781614.1	RNA polymerase factor sigma-54	-
N149_RS05430 (N149_0633)	lptB	1093974..1094702 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
N149_RS05435 (N149_0632)	tsaE	1094695..1095102 (-)	408	WP_002776418.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
N149_RS05440 (N149_0631)	-	1095099..1095344 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 76054.45 Da
• Isoelectric Point: 6.3996

>NTDB_id=52465 N149_RS05415 WP_002784244.1 1089105..1091078(+) (uvrB) [Campylobacter coli 15-537360]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKVKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKIVKELHKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=52465 N149_RS05415 WP_002784244.1 1089105..1091078(+) (uvrB) [Campylobacter coli 15-537360]
ATGTTAGAACTTACAAGCGATTTTAAACCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCAACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATGAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGACATTTATCCAGCTTATTATGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGCGATGAGCTTGATGCTATGTATCATTACAATGTTTTAGAAAATAAAAAAGTCAAAGATTTAAAACGCTTCATACTC
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGACATTTAACAGGGCTTAAAGAAGGTGATACTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAAATAGGAAATTTCTTGTTATAGTCGATGAAAGCCATGTTTCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGCAGAAAACAAACCTTGGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTGTTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAATTTG
AAAAAATGCCTGCTAATGAAAGAGCTAAAATCGTAAAAGAGCTTCATAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• Ultra-violet resistance protein B (UvrB) (552-593)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

• UvrB/uvrC motif (UVR) (623-656)

• UvrB interaction domain (UvrB_inter) (158-246)

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	50.305	99.848	0.502
uvrB	Streptococcus pneumoniae TIGR4	50.305	99.848	0.502
uvrB	Streptococcus pneumoniae D39	50.305	99.848	0.502