Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   JHX84_RS10350 Genome accession   NZ_CP067043
Coordinates   2026003..2026935 (+) Length   310 a.a.
NCBI ID   WP_025650217.1    Uniprot ID   -
Organism   Bacillus velezensis strain 19573-3     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2021003..2031935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX84_RS10325 (JHX84_10320) - 2021479..2022030 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  JHX84_RS10330 (JHX84_10325) - 2022048..2023514 (+) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  JHX84_RS10335 (JHX84_10330) - 2023644..2024864 (+) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  JHX84_RS10340 (JHX84_10335) - 2024871..2025212 (-) 342 WP_003152040.1 hypothetical protein -
  JHX84_RS10345 (JHX84_10340) degQ 2025678..2025818 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JHX84_RS10350 (JHX84_10345) comQ 2026003..2026935 (+) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  JHX84_RS10360 (JHX84_10355) - 2027088..2029391 (+) 2304 Protein_2004 histidine kinase -
  JHX84_RS10365 (JHX84_10360) comA 2029472..2030116 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  JHX84_RS10370 (JHX84_10365) - 2030138..2030521 (+) 384 WP_003152054.1 hotdog fold thioesterase -
  JHX84_RS10375 (JHX84_10370) mnhG 2030561..2030935 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  JHX84_RS10380 (JHX84_10375) - 2030919..2031203 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  JHX84_RS10385 (JHX84_10380) - 2031203..2031679 (-) 477 WP_003152059.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 310 a.a.        Molecular weight: 35663.80 Da        Isoelectric Point: 5.4532

>NTDB_id=524639 JHX84_RS10350 WP_025650217.1 2026003..2026935(+) (comQ) [Bacillus velezensis strain 19573-3]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=524639 JHX84_RS10350 WP_025650217.1 2026003..2026935(+) (comQ) [Bacillus velezensis strain 19573-3]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

93.226

0.571