Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   JHX84_RS10345 Genome accession   NZ_CP067043
Coordinates   2025678..2025818 (+) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain 19573-3     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2020678..2030818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX84_RS10320 (JHX84_10315) - 2020984..2021382 (+) 399 WP_003152031.1 YueI family protein -
  JHX84_RS10325 (JHX84_10320) - 2021479..2022030 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  JHX84_RS10330 (JHX84_10325) - 2022048..2023514 (+) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  JHX84_RS10335 (JHX84_10330) - 2023644..2024864 (+) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  JHX84_RS10340 (JHX84_10335) - 2024871..2025212 (-) 342 WP_003152040.1 hypothetical protein -
  JHX84_RS10345 (JHX84_10340) degQ 2025678..2025818 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JHX84_RS10350 (JHX84_10345) comQ 2026003..2026935 (+) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  JHX84_RS10360 (JHX84_10355) - 2027088..2029391 (+) 2304 Protein_2004 histidine kinase -
  JHX84_RS10365 (JHX84_10360) comA 2029472..2030116 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  JHX84_RS10370 (JHX84_10365) - 2030138..2030521 (+) 384 WP_003152054.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=524638 JHX84_RS10345 WP_003152043.1 2025678..2025818(+) (degQ) [Bacillus velezensis strain 19573-3]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=524638 JHX84_RS10345 WP_003152043.1 2025678..2025818(+) (degQ) [Bacillus velezensis strain 19573-3]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891