Detailed information NTG0524632

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JHX84_RS08430
• Genome accession: NZ_CP067043
• Coordinates: 1648740..1649903 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 19573-3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1643740..1654903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHX84_RS08410 (JHX84_08405)	-	1644156..1645352 (+)	1197	WP_003151381.1	glycosyltransferase	-
JHX84_RS08415 (JHX84_08410)	-	1645485..1646561 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
JHX84_RS08420 (JHX84_08415)	-	1646651..1647865 (-)	1215	WP_043867473.1	LCP family protein	-
JHX84_RS08425 (JHX84_08420)	-	1647870..1648517 (-)	648	WP_043867472.1	YigZ family protein	-
JHX84_RS08430 (JHX84_08425)	degS	1648740..1649903 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
JHX84_RS08435 (JHX84_08430)	degU	1649980..1650669 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JHX84_RS08440 (JHX84_08435)	-	1650767..1651615 (+)	849	WP_043867471.1	DegV family protein	-
JHX84_RS08445 (JHX84_08440)	comFA	1651723..1653108 (+)	1386	WP_069473599.1	DEAD/DEAH box helicase	Machinery gene
JHX84_RS08450 (JHX84_08445)	-	1653166..1653450 (+)	285	WP_057080260.1	late competence development ComFB family protein	-
JHX84_RS08455 (JHX84_08450)	comFC	1653456..1654145 (+)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
JHX84_RS08460 (JHX84_08455)	-	1654219..1654638 (+)	420	WP_069473598.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=524632 JHX84_RS08430 WP_003151385.1 1648740..1649903(+) (degS) [Bacillus velezensis strain 19573-3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=524632 JHX84_RS08430 WP_003151385.1 1648740..1649903(+) (degS) [Bacillus velezensis strain 19573-3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948