Detailed information NTG0524543

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: JHZ65_RS24120
• Genome accession: NZ_CP067024
• Coordinates: 5388614..5389954 (+)
• Length: 446 a.a.
• NCBI ID: WP_007246759.1
• Uniprot ID: A0AB38EKK0
• Organism: Pseudomonas syringae pv. maculicola strain MAFF 302723
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5383614..5394954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHZ65_RS24100 (JHZ65_24105)	-	5384024..5385046 (+)	1023	WP_005769279.1	outer membrane protein assembly factor BamD	-
JHZ65_RS24105 (JHZ65_24110)	-	5385179..5386603 (-)	1425	WP_054082654.1	IS1182-like element ISPsy6 family transposase	-
JHZ65_RS24110 (JHZ65_24115)	-	5386787..5387026 (+)	240	WP_057403016.1	PP0621 family protein	-
JHZ65_RS24115 (JHZ65_24120)	pilS	5387016..5388611 (+)	1596	WP_057430384.1	sensor histidine kinase	Regulator
JHZ65_RS24120 (JHZ65_24125)	pilR	5388614..5389954 (+)	1341	WP_007246759.1	sigma-54-dependent transcriptional regulator	Regulator
JHZ65_RS24125 (JHZ65_24130)	-	5390567..5391184 (+)	618	WP_005769275.1	TetR/AcrR family transcriptional regulator	-
JHZ65_RS24130 (JHZ65_24135)	-	5391266..5392381 (+)	1116	WP_005769274.1	efflux RND transporter periplasmic adaptor subunit	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49943.93 Da
• Isoelectric Point: 6.5611

>NTDB_id=524543 JHZ65_RS24120 WP_007246759.1 5388614..5389954(+) (pilR) [Pseudomonas syringae pv. maculicola strain MAFF 302723]
MSQRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVAEAHDWLAREPFDMCLTDMRLPDGNGLELVQHIQHGYPHVPVA
MITAHGNLDTAIHALKAGAFDFVTKPVDLNRLRELVNSALSLPSATQPVHSIDSRLLGDSPPMRTLRNQIGKLARSQAPI
YISGESGSGKELVARLIHEQGPRIDKPFVPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHNGTLFLDEVADL
PLAMQVKLLRAIQEKSIRSVGGQQEQVVDVRILCATHKDLNIEVAAGRFRQDLYYRLNVIELRVPSLRERREDIDQLAAS
VLRRLAGNGAQPVARLHAHALETLKSYRFPGNVRELENMLERAYTLCENDEIHASDLRLAESASPQAQQGANLADIDNLE
DYLESIERTLILQALEETRWNRTAAAERLSLSFRSLRYRLKKLGLD

Nucleotide

• Length: 1341 bp

>NTDB_id=524543 JHZ65_RS24120 WP_007246759.1 5388614..5389954(+) (pilR) [Pseudomonas syringae pv. maculicola strain MAFF 302723]
ATGAGCCAACGGCAAAAGATCCTGATAGTCGATGATGAGCCGGATATTCGCGAACTCCTGGAGATCACCCTCGGGCGCAT
GAAGCTCGACACGCGCAGCGCCCGCAACGTTGCCGAGGCCCATGACTGGCTGGCCCGCGAGCCGTTCGATATGTGCCTGA
CCGACATGCGCCTGCCCGATGGCAACGGCCTGGAACTGGTGCAGCACATCCAGCACGGCTACCCCCATGTGCCAGTGGCG
ATGATCACCGCCCACGGCAACCTGGACACGGCGATTCATGCGTTAAAAGCCGGGGCCTTCGATTTCGTGACCAAACCGGT
GGACCTCAACCGGCTCCGCGAACTGGTCAATAGTGCTCTGAGCCTGCCCTCCGCCACTCAACCGGTGCACAGCATCGACA
GCCGTCTGCTGGGTGATTCGCCGCCGATGCGCACCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCACCCATC
TACATCAGCGGCGAATCGGGCAGTGGCAAAGAGCTGGTAGCCCGACTGATTCACGAGCAAGGGCCGCGCATCGACAAACC
GTTCGTGCCGGTCAACTGCGGGGCTATCCCTTCCGAATTGATGGAGAGCGAATTCTTCGGCCATCGCAAAGGCAGCTTCA
GCGGTGCCCACGAAGACAAGCCAGGGTTGTTTCAGGCGGCGCATAACGGCACGCTGTTTCTTGATGAGGTCGCTGATCTG
CCACTGGCCATGCAGGTAAAACTGCTGCGCGCGATCCAGGAAAAGTCCATCCGCAGCGTCGGCGGTCAGCAGGAGCAGGT
CGTTGACGTGCGCATTCTATGCGCCACCCACAAGGACCTGAATATCGAAGTCGCTGCAGGTCGTTTCCGTCAGGACCTGT
ATTACCGACTGAACGTGATCGAACTGCGCGTACCTTCACTGCGCGAGCGGCGTGAGGATATCGATCAGTTGGCAGCCAGT
GTTTTGCGACGACTTGCCGGCAACGGCGCTCAGCCCGTCGCGCGCCTGCATGCGCATGCACTGGAAACGCTAAAAAGTTA
TCGATTCCCCGGGAACGTGCGCGAACTGGAAAACATGCTGGAACGCGCTTACACCCTCTGTGAAAACGATGAGATCCACG
CCAGCGACCTGCGTCTGGCAGAGTCCGCCAGCCCCCAGGCACAACAGGGTGCGAACCTGGCTGATATCGATAACCTGGAA
GACTACCTGGAAAGCATCGAACGCACACTCATCCTCCAGGCGCTGGAAGAAACCCGCTGGAACCGCACCGCAGCGGCCGA
GCGGCTCAGTTTGTCATTCAGATCGTTGCGTTACCGGTTGAAGAAGCTGGGGCTGGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Sigma-54 interaction domain (Sigma54_activat) (137-302)

• Response regulator receiver domain (Response_reg) (7-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	78.104	99.327	0.776
pilR	Acinetobacter baumannii strain A118	48.491	100	0.504