Detailed information NTG0524542

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: JHZ65_RS24115
• Genome accession: NZ_CP067024
• Coordinates: 5387016..5388611 (+)
• Length: 531 a.a.
• NCBI ID: WP_057430384.1
• Uniprot ID: -
• Organism: Pseudomonas syringae pv. maculicola strain MAFF 302723
• Function: regulate pilin expression (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	5385179..5386603	5387016..5388611	flank	413

Gene organization within MGE regions

Location: 5385179..5388611

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHZ65_RS24105 (JHZ65_24110)	-	5385179..5386603 (-)	1425	WP_054082654.1	IS1182-like element ISPsy6 family transposase	-
JHZ65_RS24110 (JHZ65_24115)	-	5386787..5387026 (+)	240	WP_057403016.1	PP0621 family protein	-
JHZ65_RS24115 (JHZ65_24120)	pilS	5387016..5388611 (+)	1596	WP_057430384.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 531 a.a.
• Molecular weight: 58359.18 Da
• Isoelectric Point: 6.9035

>NTDB_id=524542 JHZ65_RS24115 WP_057430384.1 5387016..5388611(+) (pilS) [Pseudomonas syringae pv. maculicola strain MAFF 302723]
MTAETPSLTSPQAQRILRLYHLYRLTIGVVLVLLISSSLETELLQLANPNLFRSGCWLYLVFNILVVVLLERPSRQAQLF
GLAMTDAIMLSGLFYAAGGPSSGIGNLLIASVAISNVLLRGRIGLLIAAVSAIGIIYLTFYISFGTPSVSNDYVQAGSLG
ALCFAAALLVQALTARLQVSEGLAEQRAADVDSLEELNALILQRMRTGIVVLDARRHVVLANQGALTLLGHERLVGQVID
AYSPQLVERLRQWLINPIMVPRSITTSSIGPVLQPSFAALNRGDQRQTLIFLEDLSQIAHQAQQLKLAALGRLTAGIAHE
IRNPLGAVSHAAQLLNESEDLSAPDRRLGQIIHDQSQRIDRVIENVLQLSRRREAQPELLDLKVWLENFVSDFRSSAAAD
QSIHVQISSGMLTTRMDAGQLTQIITNLVQNGLRYSRRNHPSAQVWLNLHHDRESDLPILEVLDDGPGVSEQHLSKIFEP
FFTTESKGTGLGLYLSRELCESNQAHLEYIPRPHDGGSCLRITFAHPFKTS

Nucleotide

• Length: 1596 bp

>NTDB_id=524542 JHZ65_RS24115 WP_057430384.1 5387016..5388611(+) (pilS) [Pseudomonas syringae pv. maculicola strain MAFF 302723]
GTGACCGCTGAGACGCCTTCGCTTACCAGCCCGCAGGCGCAACGGATTCTGCGGCTGTATCACCTTTATCGACTGACCAT
TGGCGTCGTGCTGGTTCTGTTGATCTCCAGCAGCCTGGAAACCGAGTTGCTGCAACTGGCCAATCCGAATCTGTTCCGTT
CGGGCTGCTGGCTGTACCTGGTGTTCAACATTCTGGTGGTGGTGCTGCTGGAGCGCCCCAGCCGCCAGGCGCAGCTGTTT
GGCTTGGCGATGACCGACGCAATCATGCTTTCCGGGCTGTTTTATGCGGCCGGCGGGCCGTCGAGCGGCATCGGCAACCT
GTTGATCGCGTCTGTGGCGATCAGCAACGTGCTGCTGCGAGGCCGCATCGGCCTGTTGATCGCTGCTGTTTCTGCCATTG
GCATCATCTACCTGACGTTCTACATCAGCTTCGGCACACCTTCGGTGTCCAACGACTACGTGCAGGCCGGTTCTCTGGGT
GCGCTGTGCTTCGCCGCCGCGCTGTTGGTGCAGGCACTGACTGCGCGTCTGCAAGTCAGCGAGGGGCTGGCCGAGCAACG
GGCAGCGGATGTCGACAGCCTTGAAGAGCTCAATGCGCTGATCCTGCAGCGCATGCGCACCGGCATTGTGGTGCTGGATG
CGCGCCGCCATGTGGTGCTGGCCAATCAGGGGGCCTTGACCCTGCTCGGCCACGAACGATTGGTCGGTCAGGTCATCGAC
GCTTACTCGCCGCAGTTGGTCGAGCGCCTGCGCCAGTGGCTGATCAACCCGATCATGGTGCCGCGCAGCATCACCACCTC
ATCTATCGGGCCTGTGCTGCAACCCAGCTTTGCCGCGCTCAATCGGGGCGACCAGCGTCAAACGCTGATCTTCCTTGAAG
ATCTGTCGCAGATTGCCCATCAGGCGCAGCAGCTCAAGCTTGCTGCGCTGGGCCGCCTGACCGCAGGCATCGCCCACGAA
ATACGCAACCCGTTGGGTGCGGTCAGCCATGCTGCGCAGTTACTCAACGAGTCGGAAGACCTCAGCGCGCCGGATCGCCG
TCTGGGGCAGATCATTCATGATCAGTCGCAGCGCATTGATCGGGTGATTGAAAACGTCCTGCAATTGTCTCGCCGACGCG
AAGCACAACCCGAACTGCTCGACCTGAAAGTCTGGCTGGAAAATTTTGTCAGCGACTTTCGTAGCTCGGCCGCTGCGGAT
CAGTCGATTCATGTGCAAATAAGCTCAGGCATGCTGACCACTCGCATGGACGCCGGGCAACTGACCCAGATCATCACCAA
CCTGGTGCAGAACGGCCTACGCTACAGCCGCCGCAATCACCCGTCGGCGCAGGTCTGGCTGAACCTGCACCATGACCGGG
AAAGCGATTTACCCATCCTGGAAGTGCTGGACGACGGGCCGGGTGTCAGCGAACAACACCTGAGCAAGATTTTCGAACCG
TTTTTCACCACGGAAAGCAAAGGCACCGGCCTGGGTCTATACCTTTCCCGTGAATTGTGCGAAAGCAATCAGGCGCATCT
GGAATATATCCCCCGACCACACGACGGTGGCAGCTGTTTGCGCATCACCTTCGCCCACCCGTTCAAAACGAGCTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-524)

• His Kinase A (phospho-acceptor) domain (HisKA) (309-373)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	61.842	100	0.62