Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JFY49_RS11680 Genome accession   NZ_CP067019
Coordinates   2369807..2370190 (-) Length   127 a.a.
NCBI ID   WP_086195987.1    Uniprot ID   A0A1G6H6P7
Organism   Acinetobacter sp. CS-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2364807..2375190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JFY49_RS11655 (JFY49_11655) - 2365566..2367209 (-) 1644 Protein_2276 methyl-accepting chemotaxis protein -
  JFY49_RS11660 (JFY49_11660) - 2367386..2368476 (+) 1091 WP_107010211.1 IS4-like element ISAba33 family transposase -
  JFY49_RS11665 (JFY49_11665) - 2368495..2368827 (-) 333 Protein_2278 chemotaxis protein -
  JFY49_RS11670 (JFY49_11670) - 2368873..2369409 (-) 537 WP_086195985.1 chemotaxis protein CheW -
  JFY49_RS11675 (JFY49_11675) - 2369415..2369783 (-) 369 WP_086195986.1 response regulator -
  JFY49_RS11680 (JFY49_11680) pilG 2369807..2370190 (-) 384 WP_086195987.1 twitching motility response regulator PilG Regulator
  JFY49_RS11685 (JFY49_11685) - 2370471..2371115 (+) 645 WP_180082160.1 hypothetical protein -
  JFY49_RS11690 (JFY49_11690) - 2371195..2372301 (+) 1107 WP_227609453.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14225.33 Da        Isoelectric Point: 4.7278

>NTDB_id=524478 JFY49_RS11680 WP_086195987.1 2369807..2370190(-) (pilG) [Acinetobacter sp. CS-2]
MDEKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALAKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=524478 JFY49_RS11680 WP_086195987.1 2369807..2370190(-) (pilG) [Acinetobacter sp. CS-2]
ATGGACGAAAAATTCCAAAATCTAAAAGTGATGGTGATTGATGATTCAAAAACCATTCGTCGTACAGCAGAAACATTACT
CCAACGTGAAGGTTGTGAAGTCGTGACCGCAGTAGACGGGTTTGAGGCTTTGGCAAAAATTGCTGAAGCAAATCCGGATA
TTGTTTTTGTAGATATTATGATGCCACGTTTAGACGGTTATCAAACTTGTGCATTAATTAAAAATTCGCAGAATTATCAA
AATATTCCAGTCATTATGCTGTCAAGTAAAGATGGTTTATTTGACCAGGCAAAAGGTCGTGTTGTTGGTTCGGATGAGTA
TTTAACTAAACCCTTTAGTAAAGATGAATTGTTAAACGCAATCCGCAATCACGTAACAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G6H6P7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

41.026

92.126

0.378
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37