Detailed information NTG0052396

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: U471_RS13385
• Genome accession: NC_022653
• Coordinates: 2808728..2809732 (-)
• Length: 334 a.a.
• NCBI ID: WP_012118209.1
• Uniprot ID: A7Z7R8
• Organism: Bacillus amyloliquefaciens CC178
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2803728..2814732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U471_RS13360 (U471_27930)	-	2804691..2805323 (+)	633	WP_012118205.1	GNAT family N-acetyltransferase	-
U471_RS13365 (U471_27940)	-	2805348..2805992 (+)	645	WP_012118206.1	acetoin utilization AcuB family protein	-
U471_RS13370 (U471_27950)	-	2805989..2807155 (+)	1167	WP_007408773.1	acetoin utilization protein AcuC	-
U471_RS13375 (U471_27960)	motS	2807165..2807854 (-)	690	WP_012118207.1	flagellar motor protein MotS	-
U471_RS13380 (U471_27970)	motP	2807844..2808659 (-)	816	WP_012118208.1	flagellar motor protein MotP	-
U471_RS13385 (U471_27980)	ccpA	2808728..2809732 (-)	1005	WP_012118209.1	catabolite control protein A	Regulator
U471_RS13390 (U471_27990)	-	2810011..2811087 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
U471_RS13395 (U471_28000)	ytxJ	2811324..2811650 (-)	327	WP_023357089.1	bacillithiol system redox-active protein YtxJ	-
U471_RS13400 (U471_28010)	-	2811676..2812089 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
U471_RS13405 (U471_28020)	-	2812122..2812544 (-)	423	WP_007408777.1	DUF948 domain-containing protein	-
U471_RS13410 (U471_28030)	murC	2812700..2813998 (-)	1299	WP_012118211.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36954.28 Da
• Isoelectric Point: 4.8365

>NTDB_id=52396 U471_RS13385 WP_012118209.1 2808728..2809732(-) (ccpA) [Bacillus amyloliquefaciens CC178]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEQIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=52396 U471_RS13385 WP_012118209.1 2808728..2809732(-) (ccpA) [Bacillus amyloliquefaciens CC178]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTATCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACTACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCTGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGACCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCGGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTACGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATCGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACCTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCAACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCAGATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

3D structure

• AlphaFold DB: A7Z7R8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503