Detailed information NTG0520786

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: JMO09_RS06990
• Genome accession: NZ_CP080560
• Coordinates: 1409452..1410054 (+)
• Length: 200 a.a.
• NCBI ID: WP_000271550.1
• Uniprot ID: P66748
• Organism: Staphylococcus aureus strain HL17064
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1404452..1415054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JMO09_RS06950 (JMO09_001390)	-	1404468..1404587 (+)	120	WP_000840602.1	hypothetical protein	-
JMO09_RS06955 (JMO09_001391)	mreC	1404786..1405628 (+)	843	WP_042109203.1	rod shape-determining protein MreC	-
JMO09_RS06960 (JMO09_001392)	mreD	1405628..1406158 (+)	531	WP_044417372.1	rod shape-determining protein MreD	-
JMO09_RS06965 (JMO09_001393)	rplU	1406394..1406702 (+)	309	WP_000457386.1	50S ribosomal protein L21	-
JMO09_RS06970 (JMO09_001394)	-	1406708..1407028 (+)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
JMO09_RS06975 (JMO09_001395)	rpmA	1407040..1407324 (+)	285	WP_000916187.1	50S ribosomal protein L27	-
JMO09_RS06980 (JMO09_001396)	obgE	1407678..1408970 (+)	1293	WP_000496100.1	GTPase ObgE	-
JMO09_RS06985 (JMO09_001397)	-	1408983..1409438 (+)	456	WP_000368902.1	ACT domain-containing protein	-
JMO09_RS06990 (JMO09_001398)	ruvA	1409452..1410054 (+)	603	WP_000271550.1	Holliday junction branch migration protein RuvA	Machinery gene
JMO09_RS06995 (JMO09_001399)	ruvB	1410086..1411090 (+)	1005	WP_001005768.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
JMO09_RS07000 (JMO09_001400)	queA	1411092..1412117 (+)	1026	WP_220374380.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
JMO09_RS07005 (JMO09_001401)	tgt	1412140..1413279 (+)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
JMO09_RS07010 (JMO09_001402)	yajC	1413298..1413558 (+)	261	WP_001160682.1	preprotein translocase subunit YajC	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22281.50 Da
• Isoelectric Point: 6.1244

>NTDB_id=520786 JMO09_RS06990 WP_000271550.1 1409452..1410054(+) (ruvA) [Staphylococcus aureus strain HL17064]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIRTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=520786 JMO09_RS06990 WP_000271550.1 1409452..1410054(+) (ruvA) [Staphylococcus aureus strain HL17064]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCGTACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATCA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (156-197)

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA N terminal domain (RuvA_N) (1-61)

3D structure

• AlphaFold DB: P66748

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	46.231	99.5	0.46
ruvA	Streptococcus pneumoniae R6	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae D39	45.729	99.5	0.455
ruvA	Bacillus subtilis subsp. subtilis str. 168	43.216	99.5	0.43