Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SMUGS5_RS06815 Genome accession   NC_018089
Coordinates   1446405..1447208 (-) Length   267 a.a.
NCBI ID   WP_002262928.1    Uniprot ID   A0AAX1K323
Organism   Streptococcus mutans GS-5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441405..1452208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS06805 (SMUGS5_06810) smc 1442067..1445603 (-) 3537 WP_002279780.1 chromosome segregation protein SMC -
  SMUGS5_RS06810 (SMUGS5_06815) rnc 1445603..1446298 (-) 696 WP_002266141.1 ribonuclease III -
  SMUGS5_RS06815 (SMUGS5_06820) vicX 1446405..1447208 (-) 804 WP_002262928.1 MBL fold metallo-hydrolase Regulator
  SMUGS5_RS06820 (SMUGS5_06825) vicK 1447205..1448557 (-) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SMUGS5_RS06825 (SMUGS5_06830) vicR 1448550..1449257 (-) 708 WP_002262930.1 response regulator YycF Regulator
  SMUGS5_RS06830 (SMUGS5_06835) - 1449610..1450392 (+) 783 WP_002262931.1 amino acid ABC transporter ATP-binding protein -
  SMUGS5_RS06835 (SMUGS5_06840) - 1450389..1451201 (+) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  SMUGS5_RS06840 (SMUGS5_06845) - 1451219..1451923 (+) 705 WP_002279779.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29693.77 Da        Isoelectric Point: 6.1184

>NTDB_id=52038 SMUGS5_RS06815 WP_002262928.1 1446405..1447208(-) (vicX) [Streptococcus mutans GS-5]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=52038 SMUGS5_RS06815 WP_002262928.1 1446405..1447208(-) (vicX) [Streptococcus mutans GS-5]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

100

100

1

Multiple sequence alignment