Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   JFU10_RS06050 Genome accession   NZ_CP066337
Coordinates   1293106..1295397 (-) Length   763 a.a.
NCBI ID   WP_039254056.1    Uniprot ID   -
Organism   Bacillus velezensis strain Mr12     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1288106..1300397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JFU10_RS06010 - 1288566..1288997 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  JFU10_RS06015 - 1288997..1289338 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  JFU10_RS06020 - 1289331..1290812 (+) 1482 WP_166705774.1 Na+/H+ antiporter subunit D -
  JFU10_RS06025 - 1290818..1291294 (+) 477 WP_071392239.1 Na+/H+ antiporter subunit E -
  JFU10_RS06030 - 1291294..1291578 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  JFU10_RS06035 mnhG 1291562..1291936 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  JFU10_RS06040 - 1291976..1292359 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  JFU10_RS06045 comA 1292381..1293025 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  JFU10_RS06050 comP 1293106..1295397 (-) 2292 WP_039254056.1 histidine kinase Regulator
  JFU10_RS06055 comX 1295409..1295573 (-) 165 WP_007613432.1 competence pheromone ComX -
  JFU10_RS06060 - 1295573..1296484 (-) 912 WP_031378407.1 polyprenyl synthetase family protein -
  JFU10_RS06065 degQ 1296636..1296776 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JFU10_RS06070 - 1297242..1297583 (+) 342 WP_014305721.1 hypothetical protein -
  JFU10_RS06075 - 1297590..1298810 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88376.58 Da        Isoelectric Point: 7.3748

>NTDB_id=519314 JFU10_RS06050 WP_039254056.1 1293106..1295397(-) (comP) [Bacillus velezensis strain Mr12]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINGQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=519314 JFU10_RS06050 WP_039254056.1 1293106..1295397(-) (comP) [Bacillus velezensis strain Mr12]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACCATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACGGCCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATCA
AGATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATCGCATATATCAGT
GCTGGAGGATCGGCAAAAGGCGATTTGCTTAGCAGATGCATTATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTCGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCGTCATTTATGCTGCTGATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACGACAATTGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGGGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TCATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTTATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAA
GAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

54.026

100

0.545