Detailed information NTG0519259

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GKQ51_RS16900
• Genome accession: NZ_CP066310
• Coordinates: 3592355..3593695 (+)
• Length: 446 a.a.
• NCBI ID: WP_089169020.1
• Uniprot ID: -
• Organism: Azotobacter chroococcum strain HR1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3587355..3598695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GKQ51_RS16885 (GKQ51_16885)	-	3588582..3590216 (-)	1635	WP_169531404.1	NAD+ synthase	-
GKQ51_RS16890 (GKQ51_16890)	-	3590445..3590687 (+)	243	WP_131254828.1	PP0621 family protein	-
GKQ51_RS16895 (GKQ51_16895)	pilS	3590713..3592311 (+)	1599	WP_198868102.1	sensor histidine kinase	Regulator
GKQ51_RS16900 (GKQ51_16900)	pilR	3592355..3593695 (+)	1341	WP_089169020.1	sigma-54-dependent transcriptional regulator	Regulator
GKQ51_RS16905 (GKQ51_16905)	thiO	3593830..3594927 (-)	1098	WP_198866530.1	glycine oxidase ThiO	-
GKQ51_RS16910 (GKQ51_16910)	-	3595023..3595577 (-)	555	WP_198866531.1	GspH/FimT family pseudopilin	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49888.18 Da
• Isoelectric Point: 5.3362

>NTDB_id=519259 GKQ51_RS16900 WP_089169020.1 3592355..3593695(+) (pilR) [Azotobacter chroococcum strain HR1]
MSARQKALIVDDEPDIRELLEITLGRMKLDTRSARNLQEARDWLGRERFDLCLTDMRLPDGSGLELVQYIQQRHSQVPVA
MITAYGSLDTAVNALKAGAFDFLTKPVDLARLRELVATALRLHAPAIEEEAVDSRLIGDSPPMRTLRKQIAKLARSQAPV
YISGESGSGKEVVARLIHEQGPRAERPFVPVNCGAIPSELMESEFFGHRKGSFTGAIEDKQGLFQAASGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILSATHKDLAAEVAAGRFRQDLYYRLNVIELRVPPLRERREDIPALAAI
MLARLAEEAGLPPARLGEEAQEKLRSYRFPGNVRELENMLERAYTLCEDDLIQARDLRLCDTPSPGESGETSLAGIDNLE
DYLEELERRLIMQALEETRWNRTAAAERLGLSFRSMRYRLKKLGID

Nucleotide

• Length: 1341 bp

>NTDB_id=519259 GKQ51_RS16900 WP_089169020.1 3592355..3593695(+) (pilR) [Azotobacter chroococcum strain HR1]
ATGAGCGCCCGACAGAAAGCCCTGATCGTCGACGACGAGCCCGACATCCGCGAACTGCTGGAAATCACCCTGGGCCGGAT
GAAGCTCGACACCCGCAGCGCCCGCAACCTCCAGGAGGCACGCGACTGGCTGGGCCGCGAGCGCTTCGACCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCAGCGGCCTGGAGCTGGTGCAGTACATCCAGCAGCGCCACTCGCAGGTCCCGGTCGCC
ATGATCACCGCCTACGGCAGCCTGGACACCGCGGTCAATGCCCTCAAGGCCGGCGCCTTCGACTTCCTGACCAAGCCGGT
CGACCTCGCCCGCCTGCGCGAGCTGGTCGCCACCGCCCTGCGCCTGCATGCACCGGCGATCGAGGAAGAAGCGGTGGACA
GCCGGCTGATCGGCGACTCGCCGCCGATGCGCACGCTGCGCAAGCAGATCGCCAAGCTGGCGCGCAGCCAGGCGCCGGTC
TACATCAGCGGCGAGTCCGGCAGCGGCAAGGAAGTGGTCGCCCGCCTGATCCACGAACAGGGGCCGCGCGCCGAACGCCC
CTTCGTCCCGGTGAACTGCGGCGCGATTCCCTCGGAACTGATGGAAAGCGAGTTCTTCGGCCATCGCAAGGGCAGCTTCA
CCGGCGCCATCGAGGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAGGTGGCCGACCTG
CCGCTGCCGATGCAGGTCAAGCTGCTGCGTGCCATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTGGT
GGTCGACGTACGCATCCTCAGCGCCACCCACAAGGATCTGGCTGCCGAGGTCGCCGCCGGCCGCTTCCGCCAGGACCTCT
ACTACCGCCTGAACGTCATCGAGCTGCGCGTTCCGCCGCTGCGCGAGCGCCGCGAGGACATTCCGGCGCTGGCGGCGATC
ATGCTGGCGCGCCTCGCGGAGGAAGCCGGCCTGCCACCGGCCCGGCTCGGCGAGGAGGCCCAGGAAAAGCTCCGCAGCTA
CCGCTTCCCGGGCAATGTGCGCGAACTGGAGAACATGCTGGAGCGGGCCTACACCCTCTGCGAGGACGACCTGATCCAGG
CCCGCGACCTGCGCCTCTGCGACACCCCGAGCCCGGGCGAGAGCGGCGAAACCTCGCTGGCCGGCATCGACAACCTCGAG
GACTACCTGGAGGAACTCGAACGCCGGCTGATCATGCAGGCCCTCGAGGAAACCCGCTGGAACCGCACCGCCGCCGCCGA
GCGCCTGGGCCTGAGCTTCCGCTCCATGCGCTACCGTCTGAAGAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Response regulator receiver domain (Response_reg) (8-116)

• Sigma-54 interaction domain (Sigma54_activat) (136-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.135	99.552	0.848
pilR	Acinetobacter baumannii strain A118	49.244	100	0.511