Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   IGS65_RS00780 Genome accession   NZ_CP066294
Coordinates   128136..129137 (+) Length   333 a.a.
NCBI ID   WP_002262797.1    Uniprot ID   A0AAX1K324
Organism   Streptococcus mutans strain 27-3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 123136..134137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS00755 (IGS65_000755) - 123139..123657 (+) 519 WP_002304567.1 hypothetical protein -
  IGS65_RS00760 (IGS65_000760) celB 123673..125031 (+) 1359 WP_192072343.1 PTS cellobiose transporter subunit IIC -
  IGS65_RS00765 (IGS65_000765) - 125297..126067 (+) 771 WP_192072342.1 carbonic anhydrase family protein -
  IGS65_RS00770 (IGS65_000770) - 126194..126775 (+) 582 WP_002305832.1 CDP-archaeol synthase -
  IGS65_RS00775 (IGS65_000775) - 126894..127973 (-) 1080 WP_002271825.1 Xaa-Pro peptidase family protein -
  IGS65_RS00780 (IGS65_000780) ccpA 128136..129137 (+) 1002 WP_002262797.1 catabolite control protein A Regulator
  IGS65_RS00785 (IGS65_000785) - 129285..130745 (+) 1461 WP_002281904.1 alpha-amylase -
  IGS65_RS00790 (IGS65_000790) - 130855..131853 (+) 999 WP_002264973.1 glycosyltransferase -
  IGS65_RS00795 (IGS65_000795) - 131855..133189 (+) 1335 WP_002269198.1 glycosyltransferase family 4 protein -
  IGS65_RS00800 (IGS65_000800) - 133268..133460 (+) 193 Protein_150 hypothetical protein -
  IGS65_RS00805 (IGS65_000805) - 133454..134095 (+) 642 WP_002264975.1 ATPase AAA -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36613.89 Da        Isoelectric Point: 6.8583

>NTDB_id=519104 IGS65_RS00780 WP_002262797.1 128136..129137(+) (ccpA) [Streptococcus mutans strain 27-3]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=519104 IGS65_RS00780 WP_002262797.1 128136..129137(+) (ccpA) [Streptococcus mutans strain 27-3]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TTAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAGATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556