Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   JD965_RS15440 Genome accession   NZ_CP066219
Coordinates   3025353..3027644 (-) Length   763 a.a.
NCBI ID   WP_016938116.1    Uniprot ID   -
Organism   Bacillus siamensis strain B28     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3020353..3032644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JD965_RS15400 (JD965_15400) - 3020813..3021244 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  JD965_RS15405 (JD965_15405) - 3021244..3021585 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  JD965_RS15410 (JD965_15410) - 3021578..3023059 (+) 1482 WP_198698073.1 Na+/H+ antiporter subunit D -
  JD965_RS15415 (JD965_15415) - 3023065..3023541 (+) 477 WP_016938121.1 Na+/H+ antiporter subunit E -
  JD965_RS15420 (JD965_15420) - 3023541..3023825 (+) 285 WP_016938120.1 Na(+)/H(+) antiporter subunit F1 -
  JD965_RS15425 (JD965_15425) mnhG 3023809..3024183 (+) 375 WP_049627262.1 monovalent cation/H(+) antiporter subunit G -
  JD965_RS15430 (JD965_15430) - 3024223..3024606 (-) 384 WP_016938118.1 hotdog fold thioesterase -
  JD965_RS15435 (JD965_15435) comA 3024628..3025272 (-) 645 WP_047476983.1 response regulator transcription factor Regulator
  JD965_RS15440 (JD965_15440) comP 3025353..3027644 (-) 2292 WP_016938116.1 histidine kinase Regulator
  JD965_RS15445 (JD965_15445) comX 3027656..3027820 (-) 165 WP_007613432.1 competence pheromone ComX -
  JD965_RS15450 (JD965_15450) - 3027820..3028731 (-) 912 WP_029575319.1 polyprenyl synthetase family protein -
  JD965_RS15455 (JD965_15455) degQ 3028883..3029023 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  JD965_RS15460 (JD965_15460) - 3029489..3029830 (+) 342 WP_049627267.1 hypothetical protein -
  JD965_RS15465 (JD965_15465) - 3029835..3031058 (-) 1224 WP_198698074.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88602.92 Da        Isoelectric Point: 7.3986

>NTDB_id=518529 JD965_RS15440 WP_016938116.1 3025353..3027644(-) (comP) [Bacillus siamensis strain B28]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLFFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKIMEFNQG
FVMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKREEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=518529 JD965_RS15440 WP_016938116.1 3025353..3027644(-) (comP) [Bacillus siamensis strain B28]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTCTTAGTCGGCGCCACAATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAATCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCTATGGTTGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGACAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATCA
AAATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTACTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGGTCGGCAAAAGGCGATCTGCTCAGCAGATGTATCATGTTGCTAACATTAATAACTGTACCATTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTTGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATTTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTAATTGTAGCATATTATTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTAATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCATATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCTTTAACTCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAGAATTTTTACAATCTCAAACTGACATTTTTAATATACATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCAGAAAGATTCAATTACCAAGAC
AGCATTTATAAGTTTACCCAATTAATCAGAAACTCATCTTCTTTAAATCAGGTTTTTGGAGAGTTAAAAACCACCATTCT
CGAAGTAACTCTTACGAGTAAAGTGTATATATTTGAAGTCACGTATGACGGAAATGTAAAGGCATTTGACGAAAGAGACT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAATGGAGTTTAATCAAGGT
TTCGTAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAAATGAATACGCCCCGCTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TGATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAGCGTCAGTGTGAGCT
GTTTCTGGCTGATTTTAAAAGAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTTATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGCATTCACAGGCCAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTCGGGTGCAATCAGGAA
GAAGGCGGCGGACAGTCGATGAGCATGGGGCTTTCGGGCATTAAGGAGCGCGTCCGGGCGCTTGACGGCCGGATGAAAAT
CGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544