Detailed information NTG0518477

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JD965_RS01925
• Genome accession: NZ_CP066219
• Coordinates: 381467..382615 (+)
• Length: 382 a.a.
• NCBI ID: WP_045926250.1
• Uniprot ID: -
• Organism: Bacillus siamensis strain B28
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 376467..387615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JD965_RS01905 (JD965_01905)	-	376884..377567 (-)	684	WP_198698361.1	ABC transporter ATP-binding protein	-
JD965_RS01910 (JD965_01910)	-	377582..378997 (-)	1416	WP_198698362.1	ABC transporter permease	-
JD965_RS01915 (JD965_01915)	-	379210..379893 (+)	684	WP_016937264.1	response regulator transcription factor	-
JD965_RS01920 (JD965_01920)	-	379880..381313 (+)	1434	WP_198698363.1	sensor histidine kinase	-
JD965_RS01925 (JD965_01925)	rapC	381467..382615 (+)	1149	WP_045926250.1	tetratricopeptide repeat protein	Regulator
JD965_RS01930 (JD965_01930)	phrC	382599..382718 (+)	120	WP_016937261.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
JD965_RS01935 (JD965_01935)	-	382860..382958 (-)	99	WP_016937260.1	YjcZ family sporulation protein	-
JD965_RS01940 (JD965_01940)	-	383055..384419 (-)	1365	WP_198698364.1	aspartate kinase	-
JD965_RS01945 (JD965_01945)	ceuB	384834..385787 (+)	954	WP_045926248.1	ABC transporter permease	Machinery gene
JD965_RS01950 (JD965_01950)	-	385777..386724 (+)	948	WP_198698365.1	iron chelate uptake ABC transporter family permease subunit	-
JD965_RS01955 (JD965_01955)	-	386718..387476 (+)	759	WP_198698366.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45561.76 Da
• Isoelectric Point: 5.0674

>NTDB_id=518477 JD965_RS01925 WP_045926250.1 381467..382615(+) (rapC) [Bacillus siamensis strain B28]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRTD
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHRRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLENKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=518477 JD965_RS01925 WP_045926250.1 381467..382615(+) (rapC) [Bacillus siamensis strain B28]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTATCGATACATAAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTGGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAGGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAGCGGGCAGAGTTTTATTTTAAGGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAGAATGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTGTTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCTG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCACCGAC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCGTCGGAATATCACAGGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAGAATAAAAATTTGTACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.984	100	0.83
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571