Detailed information NTG0518162

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: JC774_RS15445
• Genome accession: NZ_CP066179
• Coordinates: 2940462..2941175 (-)
• Length: 237 a.a.
• NCBI ID: WP_048722965.1
• Uniprot ID: A0AAX2CGP3
• Organism: Bacillus cytotoxicus strain SM2.8
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 2935462..2946175

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC774_RS15410 (JC774_15415)	-	2935481..2935678 (-)	198	WP_048722977.1	hypothetical protein	-
JC774_RS15415 (JC774_15420)	-	2935886..2936680 (-)	795	WP_048722974.1	LysM peptidoglycan-binding domain-containing protein	-
JC774_RS15420 (JC774_15425)	abrB	2936899..2937177 (-)	279	WP_012094321.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
JC774_RS15425 (JC774_15430)	-	2937602..2937910 (-)	309	WP_140388422.1	hypothetical protein	-
JC774_RS15430 (JC774_15435)	-	2937840..2938343 (+)	504	WP_048722972.1	DUF4352 domain-containing protein	-
JC774_RS15435 (JC774_15440)	-	2938360..2938698 (+)	339	WP_087098723.1	DUF4064 domain-containing protein	-
JC774_RS15440 (JC774_15445)	-	2939055..2940461 (-)	1407	WP_048722967.1	HAMP domain-containing sensor histidine kinase	-
JC774_RS15445 (JC774_15450)	scnR	2940462..2941175 (-)	714	WP_048722965.1	response regulator transcription factor	Regulator
JC774_RS22400	-	2941276..2941479 (-)	204	WP_235436391.1	DUF1093 domain-containing protein	-
JC774_RS15455 (JC774_15460)	-	2941608..2942339 (-)	732	WP_048722963.1	ABC transporter permease	-
JC774_RS15460 (JC774_15465)	-	2942352..2943104 (-)	753	WP_048722961.1	ABC transporter permease	-
JC774_RS15465 (JC774_15470)	-	2943101..2944018 (-)	918	WP_048723104.1	ABC transporter ATP-binding protein	-
JC774_RS15470 (JC774_15475)	-	2944363..2945175 (-)	813	WP_012094306.1	MerR family transcriptional regulator	-
JC774_RS22405	-	2945574..2945957 (-)	384	WP_235436366.1	NAD(P)H-binding protein	-
JC774_RS22410	-	2945945..2946079 (-)	135	WP_235436365.1	NmrA family NAD(P)-binding protein	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 26942.45 Da
• Isoelectric Point: 6.2727

>NTDB_id=518162 JC774_RS15445 WP_048722965.1 2940462..2941175(-) (scnR) [Bacillus cytotoxicus strain SM2.8]
MGNLKDKKILIVDDEPEIRIMIERFLRKEGFFRIFSAADCTSALSLCRVDRPDIVILDVMLPDGDGFSLLSSIRQFSNMP
VLFLSARGEDEDRLLGLGLGADDYIVKPFLPRELVLRLIAVLKRVYSSPVVERLSIFQLGKQTVDLESAVVYRGETEMPL
TAKEHAILVKLYENRGRIVTSDAICQAVWGDDSYGYENTLMVHIRRVREKIEPDPSKPIYLLTVRGLGYKLLLKETH

Nucleotide

• Length: 714 bp

>NTDB_id=518162 JC774_RS15445 WP_048722965.1 2940462..2941175(-) (scnR) [Bacillus cytotoxicus strain SM2.8]
ATGGGAAATTTAAAAGATAAAAAAATCTTAATTGTCGATGATGAACCAGAAATAAGAATCATGATTGAAAGGTTCTTAAG
AAAAGAGGGATTTTTCCGGATTTTTAGTGCTGCTGATTGTACGTCAGCTCTATCGCTTTGTCGTGTAGATCGGCCAGATA
TCGTTATTCTTGATGTTATGCTACCTGATGGTGACGGCTTTTCACTTTTATCTTCGATTAGGCAGTTCTCAAATATGCCG
GTTCTGTTTCTATCTGCACGAGGAGAAGATGAGGACCGGTTACTTGGATTAGGTTTAGGGGCAGATGATTATATTGTAAA
GCCGTTCTTACCACGTGAACTCGTATTACGTCTTATCGCTGTTTTAAAACGAGTCTATTCTTCTCCTGTTGTAGAGCGTC
TATCAATCTTTCAATTAGGGAAACAAACTGTGGACTTAGAAAGCGCTGTTGTGTATAGGGGTGAAACAGAAATGCCCTTA
ACAGCAAAAGAACATGCTATTCTTGTAAAGCTATATGAGAATCGAGGTCGAATTGTGACAAGCGACGCTATATGTCAAGC
AGTTTGGGGAGATGATAGCTACGGTTACGAAAATACATTAATGGTCCATATTAGGCGAGTACGTGAAAAAATTGAACCAG
ATCCCTCCAAACCGATTTATCTTCTTACTGTGAGGGGACTAGGGTATAAATTGCTTTTGAAGGAGACGCATTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	49.782	96.624	0.481
vicR	Streptococcus mutans UA159	40.611	96.624	0.392
micA	Streptococcus pneumoniae Cp1015	40.351	96.203	0.388