Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   JC624_RS12895 Genome accession   NZ_CP066124
Coordinates   2672911..2673618 (+) Length   235 a.a.
NCBI ID   WP_005070320.1    Uniprot ID   A0A009I7W0
Organism   Acinetobacter pittii strain 32292     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2667911..2678618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC624_RS12875 - 2670721..2671530 (+) 810 WP_227061557.1 M23 family metallopeptidase -
  JC624_RS12880 phnO 2671527..2671952 (-) 426 WP_227061559.1 GNAT family N-acetyltransferase -
  JC624_RS12885 - 2672050..2672472 (-) 423 WP_002121528.1 OsmC family protein -
  JC624_RS12890 - 2672551..2672670 (-) 120 WP_218660134.1 hypothetical protein -
  JC624_RS12895 crp 2672911..2673618 (+) 708 WP_005070320.1 cAMP-activated global transcriptional regulator CRP Regulator
  JC624_RS12900 tas 2673778..2674827 (+) 1050 WP_227061561.1 NADP(H)-dependent aldo-keto reductase -
  JC624_RS12905 - 2674882..2675661 (-) 780 WP_002121572.1 M48 family metallopeptidase -
  JC624_RS12910 - 2675777..2676094 (-) 318 WP_002121533.1 hypothetical protein -
  JC624_RS12915 purA 2676217..2677536 (-) 1320 WP_002121613.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26526.09 Da        Isoelectric Point: 4.6573

>NTDB_id=517581 JC624_RS12895 WP_005070320.1 2672911..2673618(+) (crp) [Acinetobacter pittii strain 32292]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENTVSDDDYDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=517581 JC624_RS12895 WP_005070320.1 2672911..2673618(+) (crp) [Acinetobacter pittii strain 32292]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCCCCGGGGCAACTACCTGAATCCGTTAAAGCATTGCTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCGATTATTTTGCGTGAAGATGACGAACGTGAAATTGTTGTTGCCTATTTAAATCCGGGCGATTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCCGAAGTTCGAACTCGTGATGTCTGTGAAATTGCAGA
GATCTCTTATGACAACTTCCACGAACTTAGCAAACAATACCCAGACTTAAGCTATGCTGTTTTTGCACAATTAGTTCGCC
GTCTAAAAAATACGACTCGTAAAATGACAGATCTTGCATTCATTGATGTGTCTGGCCGTATTGCACGTTGCTTAATCGAT
CTATCCTCTCAACCTGAAGCAATGATTTTGCCGAATGGTCGTCAAATTCGTATTACTCGTCAAGAAATTGGCCGTATTGT
TGGATGTTCACGTGAGATGGTTGGCCGTGTACTCAAAACCTTAGAAGATCAAGGTATGATCCAAACTGATGGTAAAGCCA
TTCTTATTTTTGATGCATCATTAGAAGAAAACACTGTTTCTGATGATGACTACGACGATGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009I7W0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

97.447

100

0.974
  crp Vibrio cholerae strain A1552

47.087

87.66

0.413
  crp Haemophilus influenzae Rd KW20

48.718

82.979

0.404