Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JC624_RS03290 Genome accession   NZ_CP066124
Coordinates   667170..667553 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain 32292     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 662170..672553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC624_RS03280 nolF 665068..666177 (-) 1110 WP_078221320.1 efflux RND transporter periplasmic adaptor subunit -
  JC624_RS03285 - 666247..666885 (-) 639 WP_213033966.1 hypothetical protein -
  JC624_RS03290 pilG 667170..667553 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  JC624_RS03295 pilH 667577..667939 (+) 363 WP_046811934.1 response regulator -
  JC624_RS03300 pilI 667996..668532 (+) 537 WP_046811935.1 chemotaxis protein CheW -
  JC624_RS03305 - 668579..670660 (+) 2082 WP_227062755.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=517572 JC624_RS03290 WP_000389061.1 667170..667553(+) (pilG) [Acinetobacter pittii strain 32292]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=517572 JC624_RS03290 WP_000389061.1 667170..667553(+) (pilG) [Acinetobacter pittii strain 32292]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGACGGTTATCAAACCTGTGCGCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATTATGCTCTCTAGTAAAGATGGTCTGTTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37