Detailed information NTG0051755

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: A458_RS24960
• Genome accession: NC_018028
• Coordinates: 715332..716669 (-)
• Length: 445 a.a.
• NCBI ID: WP_014819061.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri CCUG 29243
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 710332..721669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A458_RS24950 (A458_03200)	-	712385..713980 (-)	1596	WP_014819059.1	response regulator	-
A458_RS24955 (A458_03205)	-	714196..715254 (+)	1059	WP_014819060.1	DUF2333 family protein	-
A458_RS24960 (A458_03210)	pilR	715332..716669 (-)	1338	WP_014819061.1	sigma-54-dependent transcriptional regulator	Regulator
A458_RS24965 (A458_03215)	pilS	716794..718386 (-)	1593	WP_014819062.1	sensor histidine kinase	Regulator
A458_RS24970 (A458_03220)	-	718376..718609 (-)	234	WP_014819063.1	PP0621 family protein	-
A458_RS24975 (A458_03225)	-	718726..719715 (-)	990	WP_014819064.1	outer membrane protein assembly factor BamD	-
A458_RS24980 (A458_03230)	rluD	719921..720895 (+)	975	WP_014819065.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
A458_RS24985 (A458_03235)	pgeF	720892..721626 (+)	735	WP_014819066.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49500.98 Da
• Isoelectric Point: 6.4124

>NTDB_id=51755 A458_RS24960 WP_014819061.1 715332..716669(-) (pilR) [Stutzerimonas stutzeri CCUG 29243]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPDGSGLELVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVGTALRLRAPTAEMPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLAEAM
LRRLAAECGDSSARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGVSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=51755 A458_RS24960 WP_014819061.1 715332..716669(-) (pilR) [Stutzerimonas stutzeri CCUG 29243]
ATGACCGCGCGCCAAAAAGCACTGATCATCGATGACGAGCCGGATATCCGCGAACTGCTGGAAATCACTCTTGGCCGCAT
GAAACTCGATACCCGCAGCGCTCGCAATCTCAAGGAAGCGCGCGAATGCCTGGCCCGCGAGCATTACGACCTGTGCCTTA
CCGATATGCGTCTGCCCGATGGCAGCGGACTGGAGCTGGTGCAATACATTCAGCAACAGCACCCGCAGCTGCCGGTGGCG
ATGATCACTGCATACGGCAGCCTGGATACCGCCATTGGCGCGCTCAAGGCTGGGGCATTCGACTTTCTCACCAAACCGGT
GGACCTCAACCGCTTGCGCGAGCTGGTCGGCACGGCCCTGCGCTTGAGGGCGCCCACAGCGGAAATGCCGGTGGACAGCC
GCCTGCTCGGCAGCTCGCCACCCATGAAGACCCTTCGCAAGCAGATCGGCAAACTCGCCCGCAGCCAGGCGCCGGTTTAT
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTGGCCCGACTGATTCACGAGCAGGGTCCTCGCAGTGAAAAGCCCTT
TGTGCCCGTCAACTGCGGCGCGATCCCGTCGGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCAGTG
GCGCCATCGAGGACAAGCCCGGGCTATTCCAGGCCGCCAATGGCGGCACGCTGTTCCTCGACGAGGTAGCCGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGGCTGTACGCGCGGTCGGCGGCGCTCAGGAAGTAATGGT
CGATGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCAGCGAAGTGGCCGCAGGCCGTTTCCGCCAGGATCTGTATT
ACCGCTTGAATGTCATCGAACTGCGCGTGCCGCCACTGCGCGAGCGTCGCGAAGACATTGGCCTGCTCGCCGAAGCCATG
CTTCGGCGTCTTGCGGCGGAGTGCGGTGACAGCAGCGCTCGCCTGCACCCGGATGCTCTGGCCAAGCTGGAAAACTATCG
CTTCCCGGGGAACGTTCGTGAGCTGGAGAACATGCTCGAGCGGGCCTACACACTCTGCGAGGGCGATGAGATCAAGGCGG
GCGATCTACGCTTGGCAGACAGCCCAGGCGTATCGGAGAACGGTGAAGCCAGTCTGGCGCAGATCGACAATCTGGAAGAT
CACCTGGAAGAGATCGAGCGCAAGCTGATCATGCAGGCGCTGGAGGAAACCCGCTGGAATCGCACCGCGGCGGCCCAACG
CCTAGGTTTGACCTTTCGCTCGATGCGTTACCGGCTGAAAAAACTCGGTCTGGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	86.036	99.775	0.858
pilR	Acinetobacter baumannii strain A118	50.109	100	0.517
luxO	Vibrio cholerae strain A1552	37.808	100	0.38