Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I9190_RS17900 Genome accession   NZ_CP066121
Coordinates   3879644..3880027 (-) Length   127 a.a.
NCBI ID   WP_004827613.1    Uniprot ID   A0A0A8TKL3
Organism   Acinetobacter bereziniae strain GD0320     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3874644..3885027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I9190_RS17885 (I9190_17885) - 3876603..3878672 (-) 2070 WP_004827618.1 methyl-accepting chemotaxis protein -
  I9190_RS17890 (I9190_17890) - 3878715..3879251 (-) 537 WP_004827616.1 chemotaxis protein CheW -
  I9190_RS17895 (I9190_17895) - 3879255..3879623 (-) 369 WP_004827615.1 response regulator -
  I9190_RS17900 (I9190_17900) pilG 3879644..3880027 (-) 384 WP_004827613.1 twitching motility response regulator PilG Regulator
  I9190_RS17905 (I9190_17905) - 3880312..3880953 (+) 642 WP_171496514.1 hypothetical protein -
  I9190_RS17910 (I9190_17910) - 3881202..3882932 (+) 1731 WP_151781310.1 proline--tRNA ligase -
  I9190_RS17915 (I9190_17915) - 3883360..3884319 (-) 960 WP_151779752.1 DUF6160 family protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14213.27 Da        Isoelectric Point: 4.7172

>NTDB_id=517524 I9190_RS17900 WP_004827613.1 3879644..3880027(-) (pilG) [Acinetobacter bereziniae strain GD0320]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=517524 I9190_RS17900 WP_004827613.1 3879644..3880027(-) (pilG) [Acinetobacter bereziniae strain GD0320]
ATGGACGATAAATTTCAAAATCTTAAAGTCATGGTGATCGATGATTCTAAAACCATTCGTCGTACTGCTGAAACATTATT
ACAAAGAGAAGGTTGTGAAGTAGTTACTGCGGTAGATGGTTTTGAAGCCTTGTCTAAGATTGCTGAAGCTAATCCAGATA
TCGTTTTTGTTGATATTATGATGCCTCGTTTGGATGGTTATCAAACCTGTGCATTGATTAAAAATTCTCAAAATTATCAA
AATATTCCAGTCATTATGCTATCAAGCAAAGATGGCTTATTTGATCAAGCAAAGGGTCGAGTTGTCGGTTCTGATGAATA
TTTAACCAAACCATTTAGTAAAGATGAATTATTGAATGCAATTCGCAACCATGTGAGTGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8TKL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37