Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   I6I02_RS06340 Genome accession   NZ_CP066093
Coordinates   1407335..1408336 (-) Length   333 a.a.
NCBI ID   WP_070576321.1    Uniprot ID   A0A2W1INW3
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1402335..1413336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS06315 (I6I02_06315) - 1402748..1402933 (+) 186 WP_002890454.1 hypothetical protein -
  I6I02_RS06320 (I6I02_06320) eno 1403084..1404388 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  I6I02_RS06325 (I6I02_06325) - 1404594..1405049 (+) 456 WP_049546187.1 YueI family protein -
  I6I02_RS06330 (I6I02_06330) - 1405080..1406195 (-) 1116 WP_073950837.1 glycerate kinase -
  I6I02_RS06335 (I6I02_06335) - 1406208..1407275 (-) 1068 WP_198463276.1 MmcQ/YjbR family DNA-binding protein -
  I6I02_RS06340 (I6I02_06340) ccpA 1407335..1408336 (-) 1002 WP_070576321.1 catabolite control protein A Regulator
  I6I02_RS06345 (I6I02_06345) - 1408651..1409733 (+) 1083 WP_037597586.1 M24 family metallopeptidase -
  I6I02_RS06350 (I6I02_06350) - 1409830..1410198 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  I6I02_RS06355 (I6I02_06355) - 1410200..1411606 (-) 1407 WP_195950511.1 Cof-type HAD-IIB family hydrolase -
  I6I02_RS06360 (I6I02_06360) smpB 1411753..1412217 (-) 465 WP_002885905.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36702.62 Da        Isoelectric Point: 5.4827

>NTDB_id=517363 I6I02_RS06340 WP_070576321.1 1407335..1408336(-) (ccpA) [Streptococcus salivarius strain FDAARGOS_1045]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKVAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYRDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=517363 I6I02_RS06340 WP_070576321.1 1407335..1408336(-) (ccpA) [Streptococcus salivarius strain FDAARGOS_1045]
ATGAATACTGATGAAACAATCACTATTTATGACGTTGCGCGTGAGGCAGGCGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTATCGTCCAAATG
CGGTTGCACGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTCATCCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGATGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACTCCGATTGTCCTAGCAGGAACAGTGGACCTCGAGCACCAATTACCGAGC
GTTAATATCGACTATAAAGTTGCCGTTGAGGATTCTGTAACGCAACTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAACTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGTT
ACAATGAAGGTCTTGTCTTTGAAGCCAAATATAGCTATAGAGATGGCTTTGATTTAGCACAACGTGTTTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAACTCGAAGAAAAAGATGTT
ATTCTTAATCACGGTCTTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2W1INW3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.177

100

0.772

  ccpA Streptococcus pneumoniae D39

76.276

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553