Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6I02_RS04860 Genome accession   NZ_CP066093
Coordinates   1100328..1101140 (-) Length   270 a.a.
NCBI ID   WP_037600654.1    Uniprot ID   A0A074J267
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1095328..1106140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS04835 (I6I02_04835) - 1096317..1096703 (-) 387 WP_049545096.1 DUF1934 domain-containing protein -
  I6I02_RS04840 (I6I02_04840) - 1096796..1097653 (-) 858 WP_198463939.1 GNAT family N-acetyltransferase -
  I6I02_RS04845 (I6I02_04845) yidA 1097832..1098641 (+) 810 WP_002890845.1 sugar-phosphatase -
  I6I02_RS04850 (I6I02_04850) - 1098643..1099857 (+) 1215 WP_155198602.1 aminoacyltransferase -
  I6I02_RS04855 (I6I02_04855) - 1099909..1100268 (-) 360 WP_037597735.1 YbaN family protein -
  I6I02_RS04860 (I6I02_04860) vicX 1100328..1101140 (-) 813 WP_037600654.1 MBL fold metallo-hydrolase Regulator
  I6I02_RS04865 (I6I02_04865) vicK 1101146..1102486 (-) 1341 WP_198463940.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6I02_RS04870 (I6I02_04870) vicR 1102479..1103186 (-) 708 WP_037600497.1 response regulator YycF Regulator
  I6I02_RS04875 (I6I02_04875) - 1103472..1104239 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  I6I02_RS04880 (I6I02_04880) - 1104249..1105082 (+) 834 WP_198463941.1 transporter substrate-binding domain-containing protein -
  I6I02_RS04885 (I6I02_04885) - 1105100..1105798 (+) 699 WP_198463942.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30122.99 Da        Isoelectric Point: 5.3499

>NTDB_id=517357 I6I02_RS04860 WP_037600654.1 1100328..1101140(-) (vicX) [Streptococcus salivarius strain FDAARGOS_1045]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=517357 I6I02_RS04860 WP_037600654.1 1100328..1101140(-) (vicX) [Streptococcus salivarius strain FDAARGOS_1045]
ATGACCTCAGATTTAGGATTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAGACTCCAGA
AAAGAAGATTCTTGTGGACGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAAATCGATCGTGATCCGAGTG
ATCTGGATGCTATCTTAGTTACTCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGACAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAGGATGGAAAAAGTTTTGTAATGCTGACGGATACGGGTTATGTTTCTGATCGCATGGCA
GGTATTATTGAGAATGCTGATGGCTATTTGATTGAGTCCAATCATGATATTGAAATCCTCAGAGCAGGTTCATATCCTTG
GTCAACTAAGCAACGTATCCTCTCTGATCAAGGTCACTTATGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATAG
GTAACAAAACTAAAAAGATCTACTTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAGTTGGCCCACATGACTATGGAA
AATCAGCTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTCAAGGTTTATGATACCTCACCAGATACAGCGACACCACT
GACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A074J267

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.612

99.259

0.77