Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6H74_RS09655 Genome accession   NZ_CP066069
Coordinates   1952784..1953593 (-) Length   269 a.a.
NCBI ID   WP_115256786.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1947784..1958593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS09640 (I6H74_09635) rnc 1949226..1949918 (-) 693 WP_003057240.1 ribonuclease III -
  I6H74_RS09645 (I6H74_09640) - 1950127..1951143 (+) 1017 WP_115256787.1 IS30 family transposase -
  I6H74_RS09650 (I6H74_09645) - 1951828..1952703 (+) 876 WP_046177434.1 helix-turn-helix transcriptional regulator -
  I6H74_RS09655 (I6H74_09650) vicX 1952784..1953593 (-) 810 WP_115256786.1 MBL fold metallo-hydrolase Regulator
  I6H74_RS09660 (I6H74_09655) vicK 1953597..1954949 (-) 1353 WP_115256785.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6H74_RS09665 (I6H74_09660) vicR 1954942..1955652 (-) 711 WP_003049952.1 response regulator YycF Regulator
  I6H74_RS09670 (I6H74_09665) - 1955911..1956705 (+) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  I6H74_RS09675 (I6H74_09670) - 1956705..1957505 (+) 801 WP_115256784.1 transporter substrate-binding domain-containing protein -
  I6H74_RS09680 (I6H74_09675) - 1957519..1958220 (+) 702 WP_003057191.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30173.44 Da        Isoelectric Point: 6.0733

>NTDB_id=517118 I6H74_RS09655 WP_115256786.1 1952784..1953593(-) (vicX) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTCPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=517118 I6H74_RS09655 WP_115256786.1 1952784..1953593(-) (vicX) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAAGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTGCCCAGACACAGCTTGTCCTTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762