Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6H78_RS03755 Genome accession   NZ_CP066059
Coordinates   792743..794725 (-) Length   660 a.a.
NCBI ID   WP_198460121.1    Uniprot ID   A0A7T4M2W0
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 787743..799725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS03755 (I6H78_03755) amiA3 792743..794725 (-) 1983 WP_198460121.1 peptide ABC transporter substrate-binding protein Regulator
  I6H78_RS03760 (I6H78_03760) - 794932..795960 (-) 1029 WP_232619946.1 acyltransferase family protein -
  I6H78_RS03765 (I6H78_03765) - 795986..796990 (-) 1005 WP_198460123.1 glycosyltransferase family 2 protein -
  I6H78_RS03770 (I6H78_03770) - 796992..798029 (-) 1038 WP_232619947.1 galactofuranosyltransferase -
  I6H78_RS03775 (I6H78_03775) - 798045..798836 (-) 792 WP_000789629.1 DUF4422 domain-containing protein -

Sequence

Protein


Download         Length: 660 a.a.        Molecular weight: 73308.58 Da        Isoelectric Point: 4.5642

>NTDB_id=516943 I6H78_RS03755 WP_198460121.1 792743..794725(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1021]
MKSSKLLALAGVTLLAAATLAACSGSSSNAKGEKTFSYIYETDPDNLNYLTTGKAATANITSNVIDGLLENDRYGNFVPS
MAEDWSVSKDGLTYTYTLRKDAKWYTSEGEEYAEVKAQDFVTGLKYAADKKSDGLYLVQESIKGLDAYVKGEITDFSQVG
IKALDDYTVQYTLNKPESFWNSKTTMGVLAPVNEEFLNSKGDDFAKGTDPSSILYNGPFLLKSIVAKSSVEFEKNPNYWD
KDNVHLDKVKLSFWDGQDTNKPTEAFKDGSFTMARLFPTSASYSETEKAFKDNIVYTQQDSTTYLVGTNIDRQSYKYTSK
TTDEEKASTKKALLNKDFRQAIAFGFDRTAYASQVNGASGATKLLRNLFVPPTFVQTDGKNFGELVKEKLVTYGDEWSNV
NLDDAQDGLYSPDKAKAEFAKAKAALQAEGVKFPIHLDMPVDQTNTTKVQRVQSFKQSVEENLGSDNVVIDIQQLQKDDV
QNITYFAETAAGEDWDISDNVGWSPDYIDPSTYLDIIKPSVGENTKTYLGFDSGTNNAAAKQVGLEDYEKMVVEAGEETT
DVSKRYEKYAAAQAWLTDSALLIPTTSQTGRPMLSKMVPFTLPFAYSGNKGMSEALLYKYLEVQDKAVTTEEYQKAQEKW
LKEKEESNKKAQEDLANHVK

Nucleotide


Download         Length: 1983 bp        

>NTDB_id=516943 I6H78_RS03755 WP_198460121.1 792743..794725(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1021]
ATGAAAAGTTCAAAACTACTTGCCCTTGCGGGTGTGACGTTATTGGCAGCTGCGACTCTTGCAGCCTGCTCTGGATCAAG
TTCAAATGCTAAAGGTGAGAAAACATTCTCATACATTTACGAAACGGATCCTGATAACCTAAACTATTTGACAACTGGTA
AGGCAGCTACAGCGAATATTACGAGCAACGTTATCGATGGCTTGCTTGAAAATGACCGCTACGGTAACTTTGTACCATCT
ATGGCTGAGGATTGGTCTGTATCTAAGGATGGATTGACTTACACGTATACACTCCGAAAGGATGCAAAATGGTATACATC
TGAAGGTGAGGAGTATGCAGAAGTTAAAGCTCAAGACTTTGTAACTGGTCTTAAGTATGCTGCTGATAAGAAATCAGATG
GTCTTTACCTGGTTCAGGAATCTATCAAGGGATTGGATGCTTACGTCAAAGGAGAAATTACAGATTTTTCTCAAGTAGGA
ATCAAAGCTCTTGATGATTATACCGTTCAATACACATTGAACAAGCCAGAAAGTTTCTGGAATTCTAAGACAACAATGGG
TGTTCTGGCTCCTGTTAATGAAGAATTTTTGAACTCTAAAGGGGATGACTTTGCTAAGGGTACGGACCCAAGCAGCATTC
TCTATAATGGACCATTCTTACTCAAATCAATCGTAGCCAAATCATCAGTCGAGTTCGAAAAGAATCCAAACTATTGGGAC
AAAGACAATGTTCATCTTGATAAAGTGAAATTATCCTTCTGGGATGGTCAAGATACCAATAAGCCAACTGAAGCTTTCAA
AGACGGTAGCTTTACAATGGCTCGCCTCTTCCCAACAAGTGCTAGTTACTCAGAGACTGAAAAAGCATTCAAAGACAATA
TCGTTTATACCCAACAAGATTCTACTACTTATTTAGTAGGTACAAATATCGATCGCCAGTCTTATAAGTACACTTCTAAG
ACAACAGATGAGGAAAAAGCATCAACCAAGAAGGCACTTTTGAATAAGGACTTCCGTCAAGCTATTGCATTTGGTTTTGA
CAGAACAGCCTACGCTTCTCAAGTAAATGGTGCAAGCGGGGCTACTAAACTGCTTCGTAACTTATTTGTTCCTCCTACAT
TTGTACAGACAGATGGGAAAAACTTTGGGGAATTAGTTAAAGAAAAATTGGTGACCTATGGAGATGAGTGGAGTAACGTA
AACTTGGATGATGCCCAAGATGGACTCTACAGTCCTGACAAAGCCAAAGCAGAATTCGCTAAAGCTAAGGCGGCCCTTCA
AGCGGAAGGTGTGAAATTCCCAATCCATTTGGATATGCCTGTAGACCAAACCAATACAACAAAAGTTCAACGTGTTCAAT
CTTTTAAACAGTCAGTTGAAGAAAATCTAGGATCAGATAATGTGGTTATCGACATCCAACAGCTCCAAAAAGATGATGTT
CAAAACATTACCTACTTCGCTGAAACTGCGGCTGGAGAAGACTGGGATATTTCAGATAACGTGGGTTGGTCTCCAGACTA
TATCGATCCATCTACTTATCTTGATATTATCAAACCATCTGTAGGGGAAAATACAAAGACTTACCTAGGATTTGACTCAG
GAACAAACAACGCTGCGGCTAAGCAAGTTGGTTTAGAAGATTACGAAAAAATGGTTGTGGAAGCTGGGGAAGAAACTACT
GACGTTTCAAAACGTTATGAAAAATATGCTGCTGCCCAAGCTTGGTTGACAGACAGTGCCTTGCTCATCCCAACAACTTC
TCAAACTGGTCGTCCAATGTTGTCTAAGATGGTACCATTTACACTTCCATTTGCATACTCTGGTAACAAGGGTATGAGCG
AAGCCCTTTTGTACAAATATCTAGAAGTACAAGATAAGGCAGTGACAACAGAAGAATACCAAAAGGCTCAAGAAAAATGG
TTGAAAGAAAAAGAAGAGTCAAATAAAAAGGCTCAAGAAGATCTCGCAAACCATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4M2W0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

60.061

100

0.602
  amiA Streptococcus salivarius strain HSISS4

59.607

100

0.597
  amiA3 Streptococcus thermophilus LMG 18311

59.455

100

0.595