Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6H78_RS00475 Genome accession   NZ_CP066059
Coordinates   97380..98189 (+) Length   269 a.a.
NCBI ID   WP_198459577.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 92380..103189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS00455 (I6H78_00455) pta 93037..94011 (+) 975 WP_084859882.1 phosphate acetyltransferase -
  I6H78_RS00460 (I6H78_00460) mutY 94094..95272 (+) 1179 WP_198459576.1 A/G-specific adenine glycosylase -
  I6H78_RS00465 (I6H78_00465) micA 95329..96036 (+) 708 WP_000722058.1 response regulator YycF Regulator
  I6H78_RS00470 (I6H78_00470) micB 96029..97378 (+) 1350 WP_061407142.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6H78_RS00475 (I6H78_00475) vicX 97380..98189 (+) 810 WP_198459577.1 MBL fold metallo-hydrolase Regulator
  I6H78_RS00480 (I6H78_00480) - 98224..98571 (-) 348 WP_198459578.1 thioredoxin -
  I6H78_RS00485 (I6H78_00485) - 98683..100401 (-) 1719 WP_198459579.1 phospho-sugar mutase -
  I6H78_RS00490 (I6H78_00490) - 100812..101966 (+) 1155 WP_198459580.1 DUF4352 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29943.94 Da        Isoelectric Point: 6.3426

>NTDB_id=516927 I6H78_RS00475 WP_198459577.1 97380..98189(+) (vicX) [Streptococcus oralis strain FDAARGOS_1021]
MSEKGFKYSILASGSSGNSFYLETPKKKILIDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSRYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVVLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=516927 I6H78_RS00475 WP_198459577.1 97380..98189(+) (vicX) [Streptococcus oralis strain FDAARGOS_1021]
ATGAGTGAAAAAGGCTTTAAATACAGTATCTTAGCGTCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATCCTAATAGATGCGGGCTTGTCTGGTAAGAAAATTACAAGTCTGCTAGCTGAAATCAATCGCAAACCTGAAGATC
TGGATGCGATTCTGATTACGCATGAGCACTCAGACCATATCCATGGGGTCGGTGTCTTGGCTCGCAAATATGGTATGGAT
CTTTACGCCAATGAAAAGACTTGGCAGGCTATGGAAAATAGCAGGTATCTTGGCAAGGTTGATTCTTCGCAAAAGCATAT
CTTTGAAATGGGTAAAACCAAAACCTTTGGCGATATCGATATTGAGAGTTTTGGTGTCAGCCATGATGCAGTTGCACCCC
AGTTTTACCGATTTATGAAAGACGACAAGAGTTTTGTCGTGTTGACCGATACAGGCTATGTAAGTGACCGTATGGCTGGA
ATAGTCGAAAATGCGGATGGCTATCTTATTGAGTCAAACCATGATGTAGAGATTTTGCGAGCAGGATCTTATGCATGGCG
ACTCAAACAGCGAATTCTATCGGATCTCGGTCACCTTTCTAACGAGGATGGTGCTGAGGCCATGATTCGTGCAATGGGAA
ATCGGACTAAGAAAATCTATCTTGGGCATTTATCCAAGGAGAACAATATCAAGGAGCTGGCTCATATGACTATGGTAAAC
CAGCTAGCGCAAGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACTGCAACACCATTAAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777