Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   I6I32_RS06600 Genome accession   NZ_CP066041
Coordinates   1354143..1354766 (+) Length   207 a.a.
NCBI ID   WP_198464344.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1349143..1359766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS06590 (I6I32_06590) rpoC 1349779..1353477 (+) 3699 WP_198464343.1 DNA-directed RNA polymerase subunit beta' -
  I6I32_RS06595 (I6I32_06595) ndk 1353589..1354008 (+) 420 WP_000438309.1 nucleoside-diphosphate kinase -
  I6I32_RS06600 (I6I32_06600) comM 1354143..1354766 (+) 624 WP_198464344.1 hypothetical protein Regulator
  I6I32_RS06605 (I6I32_06605) tsaE 1354848..1355291 (+) 444 WP_000556959.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6I32_RS06610 (I6I32_06610) - 1355281..1355802 (+) 522 WP_198464345.1 GNAT family N-acetyltransferase -
  I6I32_RS06615 (I6I32_06615) brpA 1355807..1356847 (+) 1041 WP_198464346.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6I32_RS06620 (I6I32_06620) cinA 1356920..1358176 (+) 1257 WP_198464347.1 competence/damage-inducible protein A Machinery gene
  I6I32_RS06625 (I6I32_06625) recA 1358231..1359382 (+) 1152 WP_001085517.1 recombinase RecA Machinery gene
  I6I32_RS06630 (I6I32_06630) - 1359552..1359746 (+) 195 WP_000415528.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23652.59 Da        Isoelectric Point: 9.2521

>NTDB_id=516671 I6I32_RS06600 WP_198464344.1 1354143..1354766(+) (comM) [Streptococcus oralis strain FDAARGOS_1075]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVFCAGINYFHTADQSRHSVLHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATIVFLRNPIV
ISSILLYISVGFLCARLLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=516671 I6I32_RS06600 WP_198464344.1 1354143..1354766(+) (comM) [Streptococcus oralis strain FDAARGOS_1075]
ATGGTAAAATCAATTCGCCTATTGTTACTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGTCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTACTTTTTGATTTTGATTGTAGGAATTTCTGTTTTTTGTGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTGTTTTACATGTTCAAAAGAAAGTGAGTCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATAGTTTTCTTGAGGAACCCCATAGTG
ATTTCCTCGATTCTTCTTTATATCAGTGTTGGTTTTCTATGCGCACGTCTCCTTTTTCCCAAATGTATTCAAAGGGAAAT
CTCCTTTTATGGGCACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.942

99.517

0.517
  comM Streptococcus pneumoniae R6

51.942

99.517

0.517
  comM Streptococcus pneumoniae TIGR4

51.942

99.517

0.517
  comM Streptococcus mitis NCTC 12261

41.624

95.169

0.396
  comM Streptococcus mitis SK321

41.624

95.169

0.396