Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   I6I32_RS04075 Genome accession   NZ_CP066041
Coordinates   851652..852662 (-) Length   336 a.a.
NCBI ID   WP_084881331.1    Uniprot ID   A0A1X1I3N6
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 846652..857662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS04060 (I6I32_04060) - 846688..848682 (-) 1995 WP_198464982.1 CAP domain-containing protein -
  I6I32_RS04065 (I6I32_04065) - 849180..850571 (-) 1392 WP_198464983.1 Cof-type HAD-IIB family hydrolase -
  I6I32_RS04070 (I6I32_04070) - 850637..851599 (+) 963 WP_061426607.1 asparaginase -
  I6I32_RS04075 (I6I32_04075) ccpA 851652..852662 (-) 1011 WP_084881331.1 catabolite control protein A Regulator
  I6I32_RS04080 (I6I32_04080) - 852868..853185 (+) 318 WP_000886045.1 DUF960 domain-containing protein -
  I6I32_RS04085 (I6I32_04085) - 853236..854519 (-) 1284 WP_198464984.1 DUF308 domain-containing protein -
  I6I32_RS04090 (I6I32_04090) folK 854512..855333 (-) 822 WP_000372502.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  I6I32_RS04095 (I6I32_04095) folE 855492..856046 (-) 555 WP_000380930.1 GTP cyclohydrolase I FolE -
  I6I32_RS04100 (I6I32_04100) - 856027..857349 (-) 1323 WP_198464985.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37200.21 Da        Isoelectric Point: 5.5004

>NTDB_id=516644 I6I32_RS04075 WP_084881331.1 851652..852662(-) (ccpA) [Streptococcus oralis strain FDAARGOS_1075]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLLKENEKIAFVSGPLVDDINGKVRLIGYKEALKKAGHSYSEGLVFESKYSYDDGYALAERLISSQ
ATAAVVTGDELAAGVLNGLADHGVSVPEDFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=516644 I6I32_RS04075 WP_084881331.1 851652..852662(-) (ccpA) [Streptococcus oralis strain FDAARGOS_1075]
ATGAACACAGATGATACAGTAACGATTTATGACGTCGCCCGTGAAGCAGGAGTTTCAATGGCAACAGTTAGCCGTGTCGT
TAATGGCAACAAGAATGTTAAAGAGAACACTCGAAAAAAAGTCCTAGAAGTGATTGATCGCTTGGACTATCGTCCAAATG
CGGTAGCACGTGGTTTGGCTAGCAAGAAAACAACGACAGTCGGAGTTGTGATTCCGAACATTACCAATGGTTATTTCTCA
ACGCTTGCTAAGGGGATTGACGACATTGCTGAAATGTACAAGTATAACATTGTCCTAGCAAATAGTGATGAGGATGATGA
AAAGGAAGTTTCAGTGGTTAACACTCTCTTTTCAAAACAAGTCGATGGGATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAGTTTTCTCGTTCACGGACACCGGTTGTTCTTGCTGGTACTGTAGATGTAGAACACCAACTTCCAAGT
GTAAATATCGACTACAAACAAGCAACGATTGATGCTGTAAGCTACCTTCTCAAAGAAAACGAAAAGATTGCTTTTGTGAG
TGGACCACTCGTCGATGATATCAATGGCAAGGTTCGTTTGATCGGTTACAAGGAAGCCTTGAAAAAAGCAGGACATTCTT
ATAGTGAGGGATTGGTCTTTGAATCAAAATACAGCTATGACGATGGTTATGCCTTGGCAGAACGCTTGATTTCATCACAA
GCTACAGCCGCAGTTGTAACAGGTGATGAATTGGCGGCAGGTGTGTTGAATGGTTTGGCTGACCATGGTGTATCTGTGCC
AGAAGATTTTGAAATCATCACGACAGATGACTCTCAGATTGCACGATTCACTCGTCCAAACTTGACGACTATTGCCCAAC
CTCTTTATGACCTAGGTGCTATCAGCATGCGTATGTTGACTAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTGCCTCATGGTTTGACAGAACGCCGCTCTACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1I3N6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.643

100

0.946

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.922

99.405

0.884

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

98.512

0.571