Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   KW2_RS01980 Genome accession   NC_022369
Coordinates   399313..400095 (+) Length   260 a.a.
NCBI ID   WP_011834464.1    Uniprot ID   A2RIC6
Organism   Lactococcus cremoris subsp. cremoris KW2     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 394313..405095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KW2_RS01950 (kw2_0394) vicX 394332..395144 (-) 813 WP_021036728.1 MBL fold metallo-hydrolase Regulator
  KW2_RS01960 (kw2_0395) vicK 395335..396762 (-) 1428 WP_021036729.1 sensor histidine kinase Regulator
  KW2_RS01965 (kw2_0396) yycF 396755..397456 (-) 702 WP_003131580.1 response regulator YycF -
  KW2_RS01970 (kw2_0397) tmk 397634..398269 (+) 636 WP_021036730.1 dTMP kinase -
  KW2_RS01975 (kw2_0398) - 398403..399263 (+) 861 WP_021036731.1 DNA polymerase III subunit delta' -
  KW2_RS01980 (kw2_0399) yaaT 399313..400095 (+) 783 WP_011834464.1 PSP1 domain-containing protein Regulator
  KW2_RS01985 (kw2_0400) yabA 400088..400414 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  KW2_RS01990 (kw2_0401) rsmI 400414..401289 (+) 876 WP_011834466.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  KW2_RS01995 (kw2_0402) - 401367..401558 (-) 192 WP_011675474.1 hypothetical protein -
  KW2_RS02000 (kw2_0403) - 401633..402442 (-) 810 WP_021036732.1 ABC transporter permease -
  KW2_RS02005 (kw2_0404) - 402455..403384 (-) 930 WP_021036733.1 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein -
  KW2_RS02010 (kw2_0405) - 403516..404016 (+) 501 WP_015082048.1 MarR family winged helix-turn-helix transcriptional regulator -
  KW2_RS02015 (kw2_0406) mvk 404147..405079 (-) 933 WP_021036734.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29820.24 Da        Isoelectric Point: 5.4870

>NTDB_id=51648 KW2_RS01980 WP_011834464.1 399313..400095(+) (yaaT) [Lactococcus cremoris subsp. cremoris KW2]
MIYEIKFAHGESNIFATSEAELVPQSEVIIRSEKGTFYGKIIRSFSDDANLETHHTIEREVTDEDLEVILKLEELSKKAK
DKVRQLVVEQELEMKIIDVAYTFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=51648 KW2_RS01980 WP_011834464.1 399313..400095(+) (yaaT) [Lactococcus cremoris subsp. cremoris KW2]
ATGATTTATGAAATAAAATTTGCGCATGGTGAATCTAATATATTTGCAACAAGTGAGGCAGAATTAGTCCCACAATCAGA
AGTCATCATTCGTTCAGAAAAAGGAACTTTTTACGGGAAAATTATTCGTAGTTTTTCTGATGATGCTAATCTTGAAACTC
ATCATACAATTGAACGGGAAGTCACTGATGAAGATTTAGAAGTAATCTTAAAACTTGAAGAACTTTCAAAAAAGGCAAAA
GATAAGGTTCGACAACTCGTTGTGGAACAAGAACTCGAGATGAAAATTATTGATGTGGCTTACACTTTCGATCAAATGCA
ACTCTTTATCTCTTTTACCGCTGAAAATCGAGTTGATTTTCGGCTACTGCTCCGTGAATTAGCAACGACTTTTCGGATTA
GAATTGAACTTCGACAAATTGGACCAAGAGACGCGGCGAAAATTCATGGTGGACTCGGACCGTGCGGACGTCCTTTATGT
TGTTCGGAATTTGTTTACGAGTTTCCGAATGTTTCTATCAAAATGGCCAAAAATCAAAATTTATCTTTAAAACAAAATAA
ATTGAATGGACTTTGTGGTCGTTTAATGTGTTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTTC
CAGATTTTGGTGAATTTGTAACCACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTGAAA
ATACGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAGATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(57-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RIC6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.396

85.385

0.396

Multiple sequence alignment