Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6H76_RS08610 Genome accession   NZ_CP065994
Coordinates   1673828..1674637 (+) Length   269 a.a.
NCBI ID   WP_006532760.1    Uniprot ID   A0A380KRE1
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1668828..1679637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS08585 (I6H76_08585) - 1669152..1669856 (-) 705 WP_006532765.1 amino acid ABC transporter permease -
  I6H76_RS08590 (I6H76_08590) - 1669873..1670685 (-) 813 WP_043878445.1 transporter substrate-binding domain-containing protein -
  I6H76_RS08595 (I6H76_08595) - 1670696..1671460 (-) 765 WP_006532763.1 amino acid ABC transporter ATP-binding protein -
  I6H76_RS08600 (I6H76_08600) vicR 1671772..1672482 (+) 711 WP_006532762.1 response regulator YycF Regulator
  I6H76_RS08605 (I6H76_08605) vicK 1672475..1673827 (+) 1353 WP_006532761.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6H76_RS08610 (I6H76_08610) vicX 1673828..1674637 (+) 810 WP_006532760.1 MBL fold metallo-hydrolase Regulator
  I6H76_RS08615 (I6H76_08615) rnc 1674859..1675545 (+) 687 WP_006532759.1 ribonuclease III -
  I6H76_RS08620 (I6H76_08620) smc 1675697..1679236 (+) 3540 WP_006532758.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30052.96 Da        Isoelectric Point: 5.5592

>NTDB_id=516155 I6H76_RS08610 WP_006532760.1 1673828..1674637(+) (vicX) [Streptococcus infantarius strain FDAARGOS_1019]
MPENAFKYSVLASGSTGNSFYVETPQKCLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANAKTWQMIDERNMIGKLDVGQKHVFERGKTLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKRIYLGHLSKENNIKELAHMTMEN
NLMQANFAVGHDMTVFDTSPDEATPLAGL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=516155 I6H76_RS08610 WP_006532760.1 1673828..1674637(+) (vicX) [Streptococcus infantarius strain FDAARGOS_1019]
ATGCCTGAGAATGCTTTTAAATACAGTGTCTTAGCCTCCGGTTCAACTGGAAATTCATTTTATGTGGAAACGCCACAAAA
ATGTCTTTTGATAGATGCAGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGAAAACCAGAAGATT
TGGATGCTATTTTGATTACGCACGAACACTCTGATCACATTAAAGGAGTAGGAGTGCTGGCTCGCAGATACAATCTTGAT
GTATATGCCAATGCCAAAACTTGGCAAATGATTGATGAGCGCAACATGATTGGAAAACTTGATGTTGGGCAAAAACATGT
CTTTGAACGTGGTAAAACATTGACTTTTGGTGATATTGATATTGAAAGTTTTGGAGTCAGTCACGATGCTGTCGATCCGC
AATTTTACCGTTTGATGAAAGATAATAAGTCATTTGTCGTTCTGACAGATACTGGTTATGTTAGTGACCGAATGGCGGGT
GTGATTGAAAATGCTGATGGTTATCTGATTGAGTCAAACCATGATGTTGAGATTTTGCGTGCGGGTTCTTATCCGTGGAG
CTTGAAACAACGTATTCTATCTGATCGTGGTCACTTGTCAAATGAAGATGGTGCTGATACCATGATTCGTACTATCGGCA
ATCGCACAAAAAGAATTTATCTTGGACACTTGAGTAAAGAAAATAATATCAAAGAATTGGCTCATATGACCATGGAAAAT
AACTTGATGCAAGCCAATTTTGCTGTTGGTCATGACATGACTGTTTTTGATACATCACCTGATGAAGCAACGCCTTTAGC
AGGTCTATGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380KRE1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766