Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   I6H76_RS08515 Genome accession   NZ_CP065994
Coordinates   1651185..1652189 (+) Length   334 a.a.
NCBI ID   WP_006532780.1    Uniprot ID   -
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1646185..1657189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS08480 (I6H76_08480) - 1646400..1646828 (-) 429 WP_006532790.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H76_RS08485 (I6H76_08485) - 1646953..1647381 (-) 429 WP_006532789.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H76_RS08490 (I6H76_08490) - 1647555..1648283 (-) 729 WP_006532788.1 DUF554 domain-containing protein -
  I6H76_RS10220 - 1648454..1648600 (+) 147 WP_006532787.1 LysR family transcriptional regulator -
  I6H76_RS10225 - 1648641..1648889 (+) 249 WP_043878447.1 hypothetical protein -
  I6H76_RS10230 - 1648895..1649158 (+) 264 Protein_1633 LysR family transcriptional regulator -
  I6H76_RS08500 (I6H76_08500) - 1649166..1649669 (-) 504 WP_115283765.1 NAD(+) diphosphatase -
  I6H76_RS08505 (I6H76_08505) - 1649775..1650860 (-) 1086 WP_006532782.1 Xaa-Pro peptidase family protein -
  I6H76_RS08510 (I6H76_08510) - 1650927..1651139 (+) 213 WP_115283764.1 hypothetical protein -
  I6H76_RS08515 (I6H76_08515) ccpA 1651185..1652189 (+) 1005 WP_006532780.1 catabolite control protein A Regulator
  I6H76_RS08520 (I6H76_08520) - 1652284..1653282 (+) 999 WP_006532779.1 glycosyltransferase family 4 protein -
  I6H76_RS08525 (I6H76_08525) - 1653284..1654618 (+) 1335 WP_006532778.1 glycosyltransferase family 4 protein -
  I6H76_RS08530 (I6H76_08530) thrS 1654970..1656916 (+) 1947 WP_043878446.1 threonine--tRNA ligase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36680.74 Da        Isoelectric Point: 5.5113

>NTDB_id=516152 I6H76_RS08515 WP_006532780.1 1651185..1652189(+) (ccpA) [Streptococcus infantarius strain FDAARGOS_1019]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDNDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKDIAFVSGPLIDDINGKVRLAGYKEGLEKNNLSFKEGLVFEANYNYKDGYELAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEILTSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
ILNHGLKLRGTTRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=516152 I6H76_RS08515 WP_006532780.1 1651185..1652189(+) (ccpA) [Streptococcus infantarius strain FDAARGOS_1019]
ATGAACACTGATGATACGATTACAATTTATGATGTTGCACGAGAAGCAGGCGTCTCAATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAATGTAAAGGAAAACACTCGTAAAAAAGTCCTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAAAAAACTACGACAGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAAAGGTATCGACGATATTGCTGCAATGTACAAATACAATATCGTTCTTGCATCAAGTGATGAAGATAACGA
TAAAGAAGTTAATGTTGTTAACACTTTGTTTGCAAAACAAGTGGACGGTATTATCTTCATGGGACACCATTTAACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTGGTTCTAGCAGGAACAGTTGATTTAGAACACCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCCGTGGCTGATGTTGTTGATATTTTGGCTAAAAATAACAAAGATATTGCCTTTGTTTC
AGGACCACTTATCGATGATATTAACGGTAAAGTTCGTCTTGCAGGATACAAAGAAGGACTTGAAAAGAACAACCTATCAT
TCAAAGAAGGACTCGTATTTGAAGCTAACTACAACTACAAAGATGGTTATGAACTAGCTCAACGCGTGATAAATTCAGGT
GCTACAGCTGCATATGTTGCTGAAGACGAACTAGCTGCAGGTCTTTTGAATGGATTGTTTGCCGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATTCTTACAAGTAATGATTCACCAATCACATCATACACTCGTCCAAACCTAAGCTCAATTAGCCAAC
CGGTTTATGACCTTGGTGCGGTAAGTATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATT
ATTCTTAATCATGGTCTTAAATTGCGTGGTACGACACGTCAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.641

100

0.796
  ccpA Streptococcus pneumoniae D39

77.545

100

0.775
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.102

0.554