Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   I6H76_RS00040 Genome accession   NZ_CP065994
Coordinates   4358..4798 (+) Length   146 a.a.
NCBI ID   WP_006531250.1    Uniprot ID   A0A380KQ77
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..9798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS00010 (I6H76_00010) queC 168..818 (+) 651 WP_006531243.1 7-cyano-7-deazaguanine synthase QueC -
  I6H76_RS00015 (I6H76_00015) - 819..1019 (+) 201 Protein_2 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF -
  I6H76_RS00020 (I6H76_00020) - 1056..1553 (-) 498 WP_043878276.1 DUF308 domain-containing protein -
  I6H76_RS00025 (I6H76_00025) gdhA 1791..3140 (+) 1350 WP_043878277.1 NADP-specific glutamate dehydrogenase -
  I6H76_RS00030 (I6H76_00030) - 3297..3806 (+) 510 WP_006531248.1 GNAT family N-acetyltransferase -
  I6H76_RS00035 (I6H76_00035) - 3803..4213 (+) 411 WP_006531249.1 peptide deformylase -
  I6H76_RS00040 (I6H76_00040) rcrR 4358..4798 (+) 441 WP_006531250.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  I6H76_RS00045 (I6H76_00045) rcrP 4802..6616 (+) 1815 WP_006531251.1 ABC transporter ATP-binding protein Regulator
  I6H76_RS00050 (I6H76_00050) rcrQ 6606..8378 (+) 1773 WP_006531252.1 ABC transporter ATP-binding protein Regulator
  I6H76_RS00055 (I6H76_00055) - 8478..9113 (+) 636 WP_006531253.1 GTP pyrophosphokinase family protein -
  I6H76_RS00060 (I6H76_00060) - 9116..9796 (+) 681 WP_006531254.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17108.62 Da        Isoelectric Point: 8.4635

>NTDB_id=516101 I6H76_RS00040 WP_006531250.1 4358..4798(+) (rcrR) [Streptococcus infantarius strain FDAARGOS_1019]
MRDKDPFSQFRYFINLMENRVHELGEQHGVENLAGPQGFAVLYLRENEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IEVVPSEVDKRYKRVVLTELGKAKSKDIDAFHTAIHKQIFDGISREELEISGRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=516101 I6H76_RS00040 WP_006531250.1 4358..4798(+) (rcrR) [Streptococcus infantarius strain FDAARGOS_1019]
ATGCGAGACAAAGATCCCTTTTCACAATTTAGATACTTTATTAATTTGATGGAGAATCGGGTACATGAGCTCGGTGAGCA
GCATGGTGTTGAAAATCTCGCTGGTCCGCAGGGTTTTGCAGTTCTTTATTTACGTGAAAATGAAGACAAGGAAGTTTTCA
TCAAGGACATTGAACGTAAGCTTAAGATTTCAAAATCTGTGACCAGTAATTTGATTAAGCGAATGGAGAAGAATGGCTTT
ATTGAGGTGGTTCCGTCAGAGGTTGATAAGCGTTATAAGCGTGTCGTCTTGACTGAGCTAGGCAAAGCAAAATCCAAAGA
CATCGATGCTTTTCATACTGCTATTCATAAACAAATTTTTGATGGTATTAGCCGTGAAGAACTAGAAATTTCTGGTCGTG
TCTTTGATCGCATTTTGAAAAACTTAGAAAACAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380KQ77

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

54.545

97.945

0.534