Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6H76_RS00050 Genome accession   NZ_CP065994
Coordinates   6606..8378 (+) Length   590 a.a.
NCBI ID   WP_006531252.1    Uniprot ID   A0A380KP91
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1606..13378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS00025 (I6H76_00025) gdhA 1791..3140 (+) 1350 WP_043878277.1 NADP-specific glutamate dehydrogenase -
  I6H76_RS00030 (I6H76_00030) - 3297..3806 (+) 510 WP_006531248.1 GNAT family N-acetyltransferase -
  I6H76_RS00035 (I6H76_00035) - 3803..4213 (+) 411 WP_006531249.1 peptide deformylase -
  I6H76_RS00040 (I6H76_00040) rcrR 4358..4798 (+) 441 WP_006531250.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  I6H76_RS00045 (I6H76_00045) rcrP 4802..6616 (+) 1815 WP_006531251.1 ABC transporter ATP-binding protein Regulator
  I6H76_RS00050 (I6H76_00050) rcrQ 6606..8378 (+) 1773 WP_006531252.1 ABC transporter ATP-binding protein Regulator
  I6H76_RS00055 (I6H76_00055) - 8478..9113 (+) 636 WP_006531253.1 GTP pyrophosphokinase family protein -
  I6H76_RS00060 (I6H76_00060) - 9116..9796 (+) 681 WP_006531254.1 response regulator transcription factor -
  I6H76_RS00065 (I6H76_00065) - 9805..11031 (+) 1227 WP_006531255.1 HAMP domain-containing sensor histidine kinase -
  I6H76_RS00070 (I6H76_00070) - 11076..11921 (-) 846 WP_006531256.1 aldo/keto reductase -
  I6H76_RS00075 (I6H76_00075) - 11987..12901 (-) 915 WP_006531257.1 LysR family transcriptional regulator -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65149.48 Da        Isoelectric Point: 5.2307

>NTDB_id=516103 I6H76_RS00050 WP_006531252.1 6606..8378(+) (rcrQ) [Streptococcus infantarius strain FDAARGOS_1019]
MENKKKVSFYGRMKPYIKGFQFPFILAVIGAIISATVTVIGPDKLKEITNIIMKGLTPTATGMIPGIDLDKVGKIALTLA
ILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKINKVPLSYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTIL
LIGSIFMMFHSNVSMALTAIGSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK
LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMIYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDESHKERQLSDVKGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQIAIDGVDTCLMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGSHDELMTEGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=516103 I6H76_RS00050 WP_006531252.1 6606..8378(+) (rcrQ) [Streptococcus infantarius strain FDAARGOS_1019]
ATGGAAAATAAGAAAAAAGTATCCTTCTATGGCAGAATGAAGCCATACATTAAAGGTTTTCAATTTCCATTTATCCTTGC
GGTAATTGGAGCCATAATCTCAGCGACTGTTACTGTTATCGGTCCTGATAAATTAAAAGAAATTACAAATATCATTATGA
AAGGTTTGACACCAACGGCGACTGGTATGATTCCAGGAATCGACTTGGATAAAGTTGGTAAAATTGCATTAACTTTGGCA
ATTTTATACGTTATTTCAGCAGTAGTTGGTTATATTCAAAGCTTTACCGTAGCGACTATCGTTCAACGTTTTTCACAACG
TTTACGTAAAGCTATTCAGACCAAAATTAACAAGGTTCCATTGAGTTACTTTGATAGTCATTCACAAGGAGATACCCTTT
CTCGTGTGACAAATGACGTTGACTTGCTTGGTCAATCGCTTAACCAAAGTTTGGGAACTTTAGTGACATCAACCATTTTA
TTGATTGGTTCAATTTTCATGATGTTCCATTCAAATGTCAGCATGGCTTTAACAGCGATTGGGTCTGTTCTGATTGGTTT
TGTTTTGGTTATGGTTATCATGGGCTCATCACAACCATTGTTCAAACGCCAACAAAATAACTTGGCTGCGATTAACGGTT
ATGTTGAAGAAATTTACTCTGGTCATAATGTGGTAACAAGTTATAACGCTGCTGGTGAAACAAGCGAAACCTTTAAAAAA
TTAAACACCAATCTTTATAAATCAATGTGGCAATCACAGTTCTTGTCAGGTATTATGATGCCGCTTATGATTTTCGTTGG
GAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCTGTTAAAGTTATCAATGGTGATATTACCATGGGTGATGTGGTTG
CATTTATGATTTATGTTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCTTTCACACAAATGCAATCAGCAACA
GCTGCTATGAGCCGAGTCTTTGAATTTCTTGAAGAAGAGGAAATGGAAGATGAATCACACAAAGAACGTCAATTGTCTGA
TGTTAAAGGTGAAGTTACCTTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACCATTATCCATGATTTCTCTGCCG
TGGCAAAACCTGGTCAAAAGGTTGCTATCGTTGGACCAACTGGTGCTGGTAAGACAACCATTGTTAACCTTCTTATGAAA
TTCTATGAAATTGATAAAGGTCAAATTGCTATCGATGGTGTTGACACATGTTTGATGTCACGAGAAGAAGTCCATGACCA
ATTCTCAATGGTGCTTCAGGATACTTGGCTCTTTGAAGGAACAATCAAAGAAAACTTGATTTATAACCAAGAAAATATCA
CTGATGAACAAGTAGTAGCAGCAGCTAAAGCAGTTGGTGTTCACCACTTTATCATGACGCTTCCTGATGGCTATGACACA
TACCTTGATGATTCTGTTACCCTTTCAATCGGTCAAAAACAACTCTTGACCATTGCGCGTGCCCTCTTGAAAGATGCTCC
GCTTCTTATTCTAGATGAAGCAACATCATCAGTCGATACACGTACAGAAGAGTTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGCACATCATTTGTGATTGCCCACCGTTTATCAACGATCAAGAATGCTGATTTAATCCTTGTCATGAAAGAT
GGTAACATCATTGAACAAGGTAGTCATGATGAATTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAATTCACAATT
TGAAGTAGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(370-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380KP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.311

100

0.736