Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   KZA74_RS02020 Genome accession   NZ_CP079931
Coordinates   424385..426430 (-) Length   681 a.a.
NCBI ID   WP_000204953.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 17978UN     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 419385..431430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZA74_RS01985 (KZA74_01985) - 419869..420549 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  KZA74_RS01990 (KZA74_01990) - 420576..421217 (+) 642 WP_009518191.1 phospholipid-binding protein MlaC -
  KZA74_RS01995 (KZA74_01995) - 421229..421516 (+) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  KZA74_RS02000 (KZA74_02000) - 421586..422599 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  KZA74_RS02005 (KZA74_02005) - 422757..423338 (+) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  KZA74_RS02010 (KZA74_02010) - 423353..423754 (+) 402 WP_000849701.1 NUDIX hydrolase -
  KZA74_RS02015 (KZA74_02015) comF 423757..424392 (-) 636 WP_000472273.1 ComF family protein Machinery gene
  KZA74_RS02020 (KZA74_02020) recG 424385..426430 (-) 2046 WP_000204953.1 ATP-dependent DNA helicase RecG Machinery gene
  KZA74_RS02025 (KZA74_02025) - 426451..427266 (+) 816 WP_000547780.1 NAD-dependent epimerase/dehydratase family protein -
  KZA74_RS02030 (KZA74_02030) adeT2 427346..428332 (+) 987 WP_000712907.1 putative multidrug efflux protein AdeT2 -
  KZA74_RS02035 (KZA74_02035) plsB 428376..430949 (-) 2574 WP_000045404.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76435.01 Da        Isoelectric Point: 7.7343

>NTDB_id=515773 KZA74_RS02020 WP_000204953.1 424385..426430(-) (recG) [Acinetobacter baumannii strain 17978UN]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=515773 KZA74_RS02020 WP_000204953.1 424385..426430(-) (recG) [Acinetobacter baumannii strain 17978UN]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTAGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGTGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACAC
CACTACCAAAAACGCAGCTCACTGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCACGAGCCGCCAGTTGATGCCAATATGATCCAACTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGCCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAGCTACTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTAGAAGCAGATTGGCAAGTTGCGTTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATCGTGGGCACCCATGCCTTATTTCAAG
ATAACGTTGAATTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAACGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACTCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCCCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCATCGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TGCTAATTGCCACAACTGTTATTGAGGTTGGAGTAGATGTACCCAATGCGTCAATTATGGTCATTGAAAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGCGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCTGAAGCTCCTCGATACGCATATGTTTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

DEAD/DEAH box helicase (DEAD)

(262-422)

RecG wedge domain (RecG_wedge)

(7-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389