Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   I8N71_RS17170 Genome accession   NZ_CP065789
Coordinates   3255610..3256509 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis strain LBUM979     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3250610..3261509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8N71_RS17135 (I8N71_17135) mrpE 3250851..3251327 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  I8N71_RS17140 (I8N71_17140) mrpF 3251327..3251611 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  I8N71_RS17145 (I8N71_17145) mnhG 3251595..3251969 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  I8N71_RS17150 (I8N71_17150) yuxO 3252008..3252388 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  I8N71_RS17155 (I8N71_17155) comA 3252407..3253051 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  I8N71_RS17160 (I8N71_17160) comP 3253132..3255440 (-) 2309 Protein_3330 two-component system sensor histidine kinase ComP -
  I8N71_RS17165 (I8N71_17165) comX 3255455..3255622 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  I8N71_RS17170 (I8N71_17170) comQ 3255610..3256509 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  I8N71_RS17175 (I8N71_17175) degQ 3256694..3256834 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  I8N71_RS17180 (I8N71_17180) - 3257056..3257181 (+) 126 WP_003228793.1 hypothetical protein -
  I8N71_RS17185 (I8N71_17185) - 3257295..3257663 (+) 369 WP_003243784.1 hypothetical protein -
  I8N71_RS17190 (I8N71_17190) pdeH 3257639..3258868 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  I8N71_RS17195 (I8N71_17195) pncB 3259005..3260477 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  I8N71_RS17200 (I8N71_17200) pncA 3260493..3261044 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=514419 I8N71_RS17170 WP_003243039.1 3255610..3256509(-) (comQ) [Bacillus subtilis strain LBUM979]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=514419 I8N71_RS17170 WP_003243039.1 3255610..3256509(-) (comQ) [Bacillus subtilis strain LBUM979]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(44-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1