Detailed information NTG0513937

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: I6G32_RS08375
• Genome accession: NZ_CP065750
• Coordinates: 1813939..1815276 (+)
• Length: 445 a.a.
• NCBI ID: WP_041772001.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain FDAARGOS_875
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1808939..1820276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G32_RS08350 (I6G32_08350)	pgeF	1808969..1809706 (-)	738	WP_013984072.1	peptidoglycan editing factor PgeF	-
I6G32_RS08355 (I6G32_08355)	rluD	1809703..1810677 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
I6G32_RS08360 (I6G32_08360)	-	1810882..1811871 (+)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
I6G32_RS08365 (I6G32_08365)	-	1811993..1812226 (+)	234	WP_013984074.1	PP0621 family protein	-
I6G32_RS08370 (I6G32_08370)	pilS	1812216..1813808 (+)	1593	WP_013984075.1	sensor histidine kinase	Regulator
I6G32_RS08375 (I6G32_08375)	pilR	1813939..1815276 (+)	1338	WP_041772001.1	sigma-54-dependent transcriptional regulator	Regulator
I6G32_RS08380 (I6G32_08380)	-	1815320..1816378 (-)	1059	WP_011914666.1	DUF2333 family protein	-
I6G32_RS08385 (I6G32_08385)	-	1816596..1818191 (+)	1596	WP_013984077.1	response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49540.05 Da
• Isoelectric Point: 6.4140

>NTDB_id=513937 I6G32_RS08375 WP_041772001.1 1813939..1815276(+) (pilR) [Stutzerimonas stutzeri strain FDAARGOS_875]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPLKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=513937 I6G32_RS08375 WP_041772001.1 1813939..1815276(+) (pilR) [Stutzerimonas stutzeri strain FDAARGOS_875]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGTAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGCGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGATCTGAACCGCCTGCGCGAGCTGGTCAGCACCGCCCTGCGCCTGCGCGCCCCCGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGCTGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCGAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGTGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAATGTCATCGAACTGCGTGTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCAGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAGCG
ACTGGGGCTGACCTTCCGCTCGATGCGTTACCGTCTGAAGAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.36	99.775	0.852
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	37.892	100	0.38